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Items: 18

1.
Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly
Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan
PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466
PMCID:
PMC10802952
AbstractArticlePDF–2.7M
2.
Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain
Faruk Dube, Andrea Hinas, Nicolas Delhomme, Magnus Åbrink, Staffan Svärd, Eva Tydén
PLoS One. 2023; 18(5): e0285262. Published online 2023 May 4. doi: 10.1371/journal.pone.0285262
PMCID:
PMC10159168
AbstractArticlePDF–1.9M
3.
Peroxiredoxin 2 is required for the redox mediated adaptation to exercise
Qin Xia, Jose C. Casas-Martinez, Eduardo Zarzuela, Javier Muñoz, Antonio Miranda-Vizuete, Katarzyna Goljanek-Whysall, Brian McDonagh
Redox Biol. 2023 Apr; 60: 102631. Published online 2023 Feb 9. doi: 10.1016/j.redox.2023.102631
PMCID:
PMC9950660
AbstractArticlePDF–15M
4.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
5.
The transcription factor ZIP-1 promotes resistance to intracellular infection in Caenorhabditis elegans
Vladimir Lažetić, Fengting Wu, Lianne B. Cohen, Kirthi C. Reddy, Ya-Ting Chang, Spencer S. Gang, Gira Bhabha, Emily R. Troemel
Nat Commun. 2022; 13: 17. Published online 2022 Jan 10. doi: 10.1038/s41467-021-27621-w
PMCID:
PMC8748929
AbstractArticlePDF–2.7M
6.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
7.
The purine nucleoside phosphorylase pnp-1 regulates epithelial cell resistance to infection in C. elegans
Eillen Tecle, Crystal B. Chhan, Latisha Franklin, Ryan S. Underwood, Wendy Hanna-Rose, Emily R. Troemel
PLoS Pathog. 2021 Apr; 17(4): e1009350. Published online 2021 Apr 20. doi: 10.1371/journal.ppat.1009350
Correction in:
PLoS Pathog. 2022 Jul; 18(7): e1010699.
PMCID:
PMC8087013
AbstractArticlePDF–3.0M
8.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
9.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
10.
An Alternative STAT Signaling Pathway Acts in Viral Immunity in Caenorhabditis elegans
Mélanie Tanguy, Louise Véron, Przemyslaw Stempor, Julie Ahringer, Peter Sarkies, Eric A. Miska
mBio. 2017 Sep-Oct; 8(5): e00924-17. Published online 2017 Sep 5. doi: 10.1128/mBio.00924-17
PMCID:
PMC5587905
AbstractArticlePDF–2.9M
11.
Unbiased identification of substrates of protein tyrosine phosphatase ptp‐3 in C. elegans
Christopher J. Mitchell, Min-Sik Kim, Jun Zhong, Raja Sekhar Nirujogi, Anjun K. Bose, Akhilesh Pandey
Mol Oncol. 2016 Jun; 10(6): 910–920. Published online 2016 Mar 25. doi: 10.1016/j.molonc.2016.03.003
PMCID:
PMC5423164
AbstractArticlePDF–1.0M
12.
sta-1 is repressed by mir-58 family in Caenorhabditis elegans
Encarnación Lozano, María Pilar de Lucas, Alberto G. Sáez
Worm. 2016; 5(4): e1238560. Published online 2016 Sep 21. doi: 10.1080/21624054.2016.1238560
PMCID:
PMC5190142
AbstractArticlePDF–522K
13.
Surveillance Immunity: An Emerging Paradigm of Innate Defense Activation in Caenorhabditis elegans
Read Pukkila-Worley
PLoS Pathog. 2016 Sep; 12(9): e1005795. Published online 2016 Sep 15. doi: 10.1371/journal.ppat.1005795
PMCID:
PMC5025020
ArticlePDF–488K
14.
A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes
Olivier Zugasti, Nishant Thakur, Jérôme Belougne, Barbara Squiban, C. Léopold Kurz, Julien Soulé, Shizue Omi, Laurent Tichit, Nathalie Pujol, Jonathan J. Ewbank
BMC Biol. 2016; 14: 35. Published online 2016 Apr 29. doi: 10.1186/s12915-016-0256-3
PMCID:
PMC4850687
AbstractArticlePDF–2.9M
15.
Extensive Rewiring and Complex Evolutionary Dynamics in a C. elegans Multiparameter Transcription Factor Network
John S. Reece-Hoyes, Carles Pons, Alos Diallo, Akihiro Mori, Shaleen Shrestha, Sreenath Kadreppa, Justin Nelson, Stephanie DiPrima, Amelie Dricot, Bryan R. Lajoie, Philippe Souza Moraes Ribeiro, Matthew T. Weirauch, David E. Hill, Timothy R. Hughes, Chad L. Myers, Albertha J.M. Walhout
Mol Cell. Author manuscript; available in PMC 2013 Oct 10.
Published in final edited form as: Mol Cell. 2013 Jul 11; 51(1): 116–127. Published online 2013 Jun 20. doi: 10.1016/j.molcel.2013.05.018
PMCID:
PMC3794439
AbstractArticlePDF–5.2M
16.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
17.
Loss of the Transcriptional Repressor PAG-3/Gfi-1 Results in Enhanced Neurosecretion that is Dependent on the Dense-Core Vesicle Membrane Protein IDA-1/IA-2
Tao Cai, Hiroki Hirai, Tetsunari Fukushige, Ping Yu, Guofeng Zhang, Abner L. Notkins, Michael Krause
PLoS Genet. 2009 Apr; 5(4): e1000447. Published online 2009 Apr 3. doi: 10.1371/journal.pgen.1000447
PMCID:
PMC2657203
AbstractArticlePDF–1.4M
18.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M

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