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Select item 111075441.

Silencing transposable elements in the Drosophila germline

Fu Yang, Rongwen Xi

Cell Mol Life Sci. 2017 Feb; 74(3): 435–448. Published online 2016 Sep 6. doi: 10.1007/s00018-016-2353-4

PMCID:: PMC11107544

Abstract Article PDF–1.3M

Select item 94108882.

Functional editing of endogenous genes through rapid selection of cell pools (Rapid generation of endogenously tagged genes in Drosophila ovarian somatic sheath cells)

Qingcai Meng, Daniel Stoyko, Celine Marlin Andrews, Parthena Konstantinidou, Pavol Genzor, Timothy O, Alexandra R Elchert, Leif Benner, Sushil Sobti, Esther Y Katz, Astrid D Haase

Nucleic Acids Res. 2022 Aug 26; 50(15): e90. Published online 2022 May 27. doi: 10.1093/nar/gkac448

PMCID:: PMC9410888

Abstract Article PDF–3.6M

Select item 87334203.

A genetic toolkit for studying transposon control in the Drosophila melanogaster ovary

Mostafa F ElMaghraby, Laszlo Tirian, Kirsten-André Senti, Katharina Meixner, Julius Brennecke

Genetics. 2022 Jan; 220(1): iyab179. Published online 2021 Oct 30. doi: 10.1093/genetics/iyab179

PMCID:: PMC8733420

Abstract Article PDF–3.3M

Select item 84211504.

Endogenous piRNA-guided slicing triggers responder and trailer piRNA production from viral RNA in Aedes aegypti mosquitoes

Joep Joosten, Gijs J Overheul, Ronald P Van Rij, Pascal Miesen

Nucleic Acids Res. 2021 Sep 7; 49(15): 8886–8899. Published online 2021 Jul 31. doi: 10.1093/nar/gkab640

PMCID:: PMC8421150

Abstract Article PDF–2.5M

Select item 79385955.

An old weapon with a new function: PIWI-interacting RNAs in neurodegenerative diseases

Xiaobing Huang, Garry Wong

Transl Neurodegener. 2021; 10: 9. Published online 2021 Mar 8. doi: 10.1186/s40035-021-00233-6

PMCID:: PMC7938595

Abstract Article PDF–1.2M

Select item 77920476.

Roles of piRNAs in transposon and pseudogene regulation of germline mRNAs and lncRNAs

Chen Wang, Haifan Lin

Genome Biol. 2021; 22: 27. Published online 2021 Jan 8. doi: 10.1186/s13059-020-02221-x

PMCID:: PMC7792047

Abstract Article PDF–1.8M

Select item 77201537.

Structure-function analysis of microRNA 3′-end trimming by Nibbler

Wei Xie, Ivica Sowemimo, Rippei Hayashi, Juncheng Wang, Thomas R. Burkard, Julius Brennecke, Stefan L. Ameres, Dinshaw J. Patel

Proc Natl Acad Sci U S A. 2020 Dec 1; 117(48): 30370–30379. Published online 2020 Nov 16. doi: 10.1073/pnas.2018156117

PMCID:: PMC7720153

Abstract Article PDF–1.8M

Select item 69615788.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 69584399.

Assembly and Function of Gonad-Specific Non-Membranous Organelles in Drosophila piRNA Biogenesis

Shigeki Hirakata, Mikiko C. Siomi

Noncoding RNA. 2019 Dec; 5(4): 52. Published online 2019 Nov 6. doi: 10.3390/ncrna5040052

PMCID:: PMC6958439

Abstract Article PDF–1.6M

Select item 671356210.

Time-resolved small RNA sequencing unravels the molecular principles of microRNA homeostasis

Brian Reichholf, Veronika A. Herzog, Nina Fasching, Raphael A. Manzenreither, Ivica Sowemimo, Stefan L. Ameres

Mol Cell. Author manuscript; available in PMC 2020 Aug 22.

Published in final edited form as: Mol Cell. 2019 Jul 9; 75(4): 756–768.e7. Published online 2019 Jul 9. doi: 10.1016/j.molcel.2019.06.018

PMCID:: PMC6713562

Abstract Article PDF–2.7M

Select item 663635611.

The RNA-binding ATPase, Armitage, Couples piRNA Amplification in Nuage to Phased piRNA Production on Mitochondria

Daniel Tianfang Ge, Wei Wang, Cindy Tipping, Ildar Gainetdinov, Zhiping Weng, Phillip D. Zamore

Mol Cell. Author manuscript; available in PMC 2020 Jun 6.

Published in final edited form as: Mol Cell. 2019 Jun 6; 74(5): 982–995.e6. Published online 2019 May 7. doi: 10.1016/j.molcel.2019.04.006

PMCID:: PMC6636356

Abstract Article PDF–1.4M

Select item 613092012.

A Single Mechanism of Biogenesis, Initiated and Directed by PIWI Proteins, Explains piRNA Production in Most Animals

Ildar Gainetdinov, Cansu Colpan, Amena Arif, Katharine Cecchini, Phillip D. Zamore

Mol Cell. Author manuscript; available in PMC 2019 Sep 6.

Published in final edited form as: Mol Cell. 2018 Sep 6; 71(5): 775–790.e5. doi: 10.1016/j.molcel.2018.08.007

PMCID:: PMC6130920

Abstract Article PDF–1.1M

Select item 577312913.

piRNA Biogenesis in Drosophila Melanogaster

Xiawei Huang, Katalin Fejes Tóth, Alexei A. Aravin

Trends Genet. Author manuscript; available in PMC 2018 Nov 1.

Published in final edited form as: Trends Genet. 2017 Nov; 33(11): 882–894. Published online 2017 Sep 27. doi: 10.1016/j.tig.2017.09.002

PMCID:: PMC5773129

Abstract Article PDF–1.1M

Select item 570780514.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900215.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 562257116.

Drosophila exoribonuclease nibbler is a tumor suppressor, acts within the RNAⁱ machinery and is not enriched in the nuage during early oogenesis

Casimiro Castillejo-López, Xiaoli Cai, Khalid Fahmy, Stefan Baumgartner

Hereditas. 2018; 155: 12. Published online 2017 Sep 29. doi: 10.1186/s41065-017-0047-z

PMCID:: PMC5622571

Abstract Article PDF–5.5M

Select item 516493617.

Genetic and mechanistic diversity of piRNA 3' end formation

Rippei Hayashi, Jakob Schnabl, Dominik Handler, Fabio Mohn, Stefan L. Ameres, Julius Brennecke

Nature. Author manuscript; available in PMC 2017 May 16.

Published in final edited form as: Nature. 2016 Nov 24; 539(7630): 588–592. Published online 2016 Nov 16. doi: 10.1038/nature20162

PMCID:: PMC5164936

Abstract Article PDF–5.5M

Select item 488965818.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 476031019.

Antagonistic roles of Nibbler and Hen1 in modulating piRNA 3′ ends in Drosophila

Hui Wang, Zaijun Ma, Kongyan Niu, Yi Xiao, Xiaofen Wu, Chenyu Pan, Yun Zhao, Kai Wang, Yaoyang Zhang, Nan Liu

Development. 2016 Feb 1; 143(3): 530–539. doi: 10.1242/dev.128116

PMCID:: PMC4760310

Abstract Article

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937