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Select item 109457071.

Comparative interactome analysis of α-arrestin families in human and Drosophila

Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam

eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328

PMCID:: PMC10945707

Abstract Article PDF–2.8M

Select item 103323242.

The identification of protein and RNA interactors of the splicing factor Caper in the adult Drosophila nervous system

M. Brandon Titus, Adeline W. Chang, Niko Popitsch, Christopher C. Ebmeier, Jeremy M. Bono, Eugenia C. Olesnicky

Front Mol Neurosci. 2023; 16: 1114857. Published online 2023 Jun 23. doi: 10.3389/fnmol.2023.1114857

PMCID:: PMC10332324

Abstract Article PDF–4.5M

Select item 101655413.

Systematic analysis of YFP traps reveals common mRNA/protein discordance in neural tissues

Joshua S. Titlow, Maria Kiourlappou, Ana Palanca, Jeffrey Y. Lee, Dalia S. Gala, Darragh Ennis, Joyce J.S. Yu, Florence L. Young, David Miguel Susano Pinto, Sam Garforth, Helena S. Francis, Finn Strivens, Hugh Mulvey, Alex Dallman-Porter, Staci Thornton, Diana Arman, Marissa J. Millard, Aino I. Järvelin, Mary Kay Thompson, Martin Sargent, Ilias Kounatidis, Richard M. Parton, Stephen Taylor, Ilan Davis

J Cell Biol. 2023 Jun 5; 222(6): e202205129. Published online 2023 May 5. doi: 10.1083/jcb.202205129

PMCID:: PMC10165541

Abstract Article PDF–8.4M

Select item 98444624.

Roles for the RNA-Binding Protein Caper in Reproductive Output in Drosophila melanogaster

Erika J. Tixtha, Meg K. Super, M. Brandon Titus, Jeremy M. Bono, Eugenia C. Olesnicky

J Dev Biol. 2023 Mar; 11(1): 2. Published online 2022 Dec 23. doi: 10.3390/jdb11010002

PMCID:: PMC9844462

Abstract Article PDF–2.8M

Select item 79878245.

The conserved alternative splicing factor Caper regulates neuromuscular phenotypes during development and aging

M. Brandon Titus, Ethan Wright, Jeremy M. Bono, Andrea K. Poliakon, Brandon R. Goldstein, Meg K. Super, Lauren A. Young, Melpomeni Manaj, Morgan Litchford, Noreen E. Reist, Darrell J. Killian, Eugenia C. Olesnicky

Dev Biol. Author manuscript; available in PMC 2022 May 1.

Published in final edited form as: Dev Biol. 2021 May; 473: 15–32. Published online 2021 Jan 27. doi: 10.1016/j.ydbio.2021.01.011

PMCID:: PMC7987824

Abstract Article PDF–2.9M

Select item 77100956.

Identification of novel regulators of dendrite arborization using cell type-specific RNA metabolic labeling

Mohamed Y. Aboukilila, Josephine D. Sami, Jingtian Wang, Whitney England, Robert C. Spitale, Michael D. Cleary

PLoS One. 2020; 15(12): e0240386. Published online 2020 Dec 2. doi: 10.1371/journal.pone.0240386

PMCID:: PMC7710095

Abstract Article PDF–1.6M

Select item 69615787.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 65086218.

Satellite DNA-containing gigantic introns in a unique gene expression program during Drosophila spermatogenesis

Jaclyn M. Fingerhut, Jessica V. Moran, Yukiko M. Yamashita

PLoS Genet. 2019 May; 15(5): e1008028. Published online 2019 May 9. doi: 10.1371/journal.pgen.1008028

PMCID:: PMC6508621

Abstract Article PDF–5.0M

Select item 64032499.

PARP1 is a versatile factor in the regulation of mRNA stability and decay

Elena A. Matveeva, Lein F. Mathbout, Yvonne N. Fondufe-Mittendorf

Sci Rep. 2019; 9: 3722. Published online 2019 Mar 6. doi: 10.1038/s41598-019-39969-7

PMCID:: PMC6403249

Abstract Article PDF–2.7M

Select item 637875310.

Coupling of PARP1-mediated chromatin structural changes to transcriptional RNA polymerase II elongation and cotranscriptional splicing

Elena A. Matveeva, Qamar M. H. Al-Tinawi, Eric C. Rouchka, Yvonne N. Fondufe-Mittendorf

Epigenetics Chromatin. 2019; 12: 15. Published online 2019 Feb 18. doi: 10.1186/s13072-019-0261-1

PMCID:: PMC6378753

Abstract Article PDF–3.6M

Select item 615653911.

Proper splicing contributes to visual function in the aging Drosophila eye

Rachel Stegeman, Hana Hall, Spencer E. Escobedo, Henry C. Chang, Vikki M. Weake

Aging Cell. 2018 Oct; 17(5): e12817. Published online 2018 Jul 12. doi: 10.1111/acel.12817

PMCID:: PMC6156539

Abstract Article PDF–1.2M

Select item 570780512.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900213.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 555330814.

The RNA-binding protein Caper is required for sensory neuron development in Drosophila melanogaster

Eugenia C. Olesnicky, Jeremy M. Bono, Laura Bell, Logan T. Schachtner, Meghan C. Lybecker

Dev Dyn. Author manuscript; available in PMC 2018 Aug 1.

Published in final edited form as: Dev Dyn. 2017 Aug; 246(8): 610–624. Published online 2017 Jun 29. doi: 10.1002/dvdy.24523

PMCID:: PMC5553308

Abstract Article PDF–1.3M

Select item 514468015.

Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs

Hongmei Li, Chuansheng Hu, Ling Bai, Hua Li, Mingfa Li, Xiaodong Zhao, Daniel M. Czajkowsky, Zhifeng Shao

DNA Res. 2016 Dec; 23(6): 571–580. Published online 2016 Aug 24. doi: 10.1093/dnares/dsw040

PMCID:: PMC5144680

Abstract Article PDF–688K

Select item 503306116.

An integrative analysis of the InR/PI3K/Akt network identifies the dynamic response to Insulin signaling

Arunachalam Vinayagam, Meghana M. Kulkarni, Richelle Sopko, Xiaoyun Sun, Yanhui Hu, Ankita Nand, Christians Villalta, Ahmadali Moghimi, Xuemei Yang, Stephanie E. Mohr, Pengyu Hong, John Asara, Norbert Perrimon

Cell Rep. Author manuscript; available in PMC 2016 Sep 22.

Published in final edited form as: Cell Rep. 2016 Sep 13; 16(11): 3062–3074. doi: 10.1016/j.celrep.2016.08.029

PMCID:: PMC5033061

Abstract Article PDF–3.3M

Select item 502578217.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

Select item 473800518.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 470597919.

The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub

Pak N. Kwong, Michael Chambers, Ajay A. Vashisht, Wiam Turki-Judeh, Tak Yu Yau, James A. Wohlschlegel, Albert J. Courey

J Biol Chem. 2015 Dec 11; 290(50): 30119–30130. Published online 2015 Oct 19. doi: 10.1074/jbc.M115.681171

Correction in:: J Biol Chem. 2016 Mar 25; 291(13): 6784.

PMCID:: PMC4705979

Abstract Article PDF–1.3M

Select item 461798020.

Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins

Marianne C. Kramer, Dongming Liang, Deirdre C. Tatomer, Beth Gold, Zachary M. March, Sara Cherry, Jeremy E. Wilusz

Genes Dev. 2015 Oct 15; 29(20): 2168–2182. doi: 10.1101/gad.270421.115

PMCID:: PMC4617980

Abstract Article PDF–1.7M

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