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Items: 1 to 20 of 30

1.
Expanding the Drosophila toolkit for dual control of gene expression
Jonathan Zirin, Barbara Jusiak, Raphael Lopes, Benjamin Ewen-Campen, Justin A Bosch, Alexandria Risbeck, Corey Forman, Christians Villalta, Yanhui Hu, Norbert Perrimon
eLife. 2024; 12: RP94073. Published online 2024 Apr 3. doi: 10.7554/eLife.94073
PMCID:
PMC10990484
AbstractArticlePDF–6.0M
2.
Cholinergic neurons trigger epithelial Ca2+ currents to heal the gut
Afroditi Petsakou, Yifang Liu, Ying Liu, Aram Comjean, Yanhui Hu, Norbert Perrimon
Nature. Author manuscript; available in PMC 2024 May 1.
Published in final edited form as: Nature. 2023 Nov; 623(7985): 122–131. Published online 2023 Sep 18. doi: 10.1038/s41586-023-06627-y
PMCID:
PMC10699467
AbstractArticlePDF–7.5M
3.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
4.
An intestinal zinc sensor regulates food intake and developmental growth
Siamak Redhai, Clare Pilgrim, Pedro Gaspar, Lena van Giesen, Tatiana Lopes, Olena Riabinina, Théodore Grenier, Alexandra Milona, Bhavna Chanana, Jacob B. Swadling, Yi-Fang Wang, Farah Dahalan, Michaela Yuan, Michaela Wilsch-Brauninger, Wei-hsiang Lin, Nathan Dennison, Paolo Capriotti, Mara K.N. Lawniczak, Richard A. Baines, Tobias Warnecke, Nikolai Windbichler, Francois Leulier, Nicholas Bellono, Irene Miguel-Aliaga
Nature. Author manuscript; available in PMC 2022 Feb 11.
Published in final edited form as: Nature. 2020 Apr; 580(7802): 263–268. Published online 2020 Mar 18. doi: 10.1038/s41586-020-2111-5
PMCID:
PMC8833092
AbstractArticlePDF–6.2M
5.
TATA and paused promoters active in differentiated tissues have distinct expression characteristics
Vivekanandan Ramalingam, Malini Natarajan, Jeff Johnston, Julia Zeitlinger
Mol Syst Biol. 2021 Feb; 17(2): e9866. Published online 2021 Feb 5. doi: 10.15252/msb.20209866
PMCID:
PMC7863008
AbstractArticlePDF–1.6M
6.
Jouvence a small nucleolar RNA required in the gut extends lifespan in Drosophila
Stéphanie Soulé, Lucille Mellottée, Abdelkrim Arab, Chongjian Chen, Jean-René Martin
Nat Commun. 2020; 11: 987. Published online 2020 Feb 20. doi: 10.1038/s41467-020-14784-1
PMCID:
PMC7033134
AbstractArticlePDF–7.0M
7.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
8.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
9.
Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs
Hongmei Li, Chuansheng Hu, Ling Bai, Hua Li, Mingfa Li, Xiaodong Zhao, Daniel M. Czajkowsky, Zhifeng Shao
DNA Res. 2016 Dec; 23(6): 571–580. Published online 2016 Aug 24. doi: 10.1093/dnares/dsw040
PMCID:
PMC5144680
AbstractArticlePDF–688K
10.
Sir2 Acts through Hepatocyte Nuclear Factor 4 to maintain insulin Signaling and Metabolic Homeostasis in Drosophila
Rebecca A. S. Palu, Carl S. Thummel
PLoS Genet. 2016 Apr; 12(4): e1005978. Published online 2016 Apr 8. doi: 10.1371/journal.pgen.1005978
PMCID:
PMC4825955
AbstractArticlePDF–1.8M
11.
The sexual identity of adult intestinal stem cells controls organ size and plasticity
Bruno Hudry, Sanjay Khadayate, Irene Miguel-Aliaga
Nature. Author manuscript; available in PMC 2016 Aug 18.
Published in final edited form as: Nature. 2016 Feb 18; 530(7590): 344–348. doi: 10.1038/nature16953
PMCID:
PMC4800002
AbstractArticlePDF–7.5M
12.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
13.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
14.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
15.
Macrophage-Derived upd3 Cytokine Causes Impaired Glucose Homeostasis and Reduced Lifespan in Drosophila Fed a Lipid-Rich Diet
Katie J. Woodcock, Katrin Kierdorf, Clara A. Pouchelon, Valérie Vivancos, Marc S. Dionne, Frédéric Geissmann
Immunity. 2015 Jan 20; 42(1): 133–144. doi: 10.1016/j.immuni.2014.12.023
PMCID:
PMC4304720
AbstractArticlePDF–3.1M
16.
Age-associated loss of lamin-B leads to systemic inflammation and gut hyperplasia
Haiyang Chen, Xiaobin Zheng, Yixian Zheng
Cell. Author manuscript; available in PMC 2015 Nov 6.
Published in final edited form as: Cell. 2014 Nov 6; 159(4): 829–843. doi: 10.1016/j.cell.2014.10.028
Correction in:
volume 163 on page 256
PMCID:
PMC4243052
AbstractArticlePDF–4.4M
17.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
18.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
19.
Coordination of triacylglycerol and cholesterol homeostasis by DHR96 and the Drosophila LipA homolog magro
Matthew H. Sieber, Carl S. Thummel
Cell Metab. Author manuscript; available in PMC 2013 Jan 4.
Published in final edited form as: Cell Metab. 2012 Jan 4; 15(1): 122–127. Published online 2011 Dec 22. doi: 10.1016/j.cmet.2011.11.011
PMCID:
PMC3253980
AbstractArticlePDF–1.4M
20.
The Drosophila Estrogen-Related Receptor Directs a Metabolic Switch That Supports Developmental Growth
Jason M. Tennessen, Keith D. Baker, Geanette Lam, Janelle Evans, Carl S. Thummel
Cell Metab. Author manuscript; available in PMC 2012 Feb 2.
Published in final edited form as: Cell Metab. 2011 Feb 2; 13(2): 139–148. doi: 10.1016/j.cmet.2011.01.005
PMCID:
PMC3072597
AbstractArticlePDF–2.2M

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