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Select item 112445261.

N-terminal acetylation of Set1-COMPASS fine-tunes H3K4 methylation patterns

Hyeonju Woo, Junsoo Oh, Yong-Joon Cho, Goo Taeg Oh, Seon-Young Kim, Kisoon Dan, Dohyun Han, Jung-Shin Lee, TaeSoo Kim

Sci Adv. 2024 Jul 12; 10(28): eadl6280. Published online 2024 Jul 12. doi: 10.1126/sciadv.adl6280

PMCID:: PMC11244526

Abstract Article PDF–10M

Select item 108724772.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107988583.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107001384.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105166425.

ISW1a modulates cohesin distribution in centromeric and pericentromeric regions

Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz

Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612

PMCID:: PMC10516642

Abstract Article PDF–2.8M

Select item 102333686.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 92860237.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098118.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 84929619.

Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier

Ülkü Uzun, Thomas Brown, Harry Fischl, Andrew Angel, Jane Mellor

Cell Rep. 2021 Sep 28; 36(13): 109755. Published online 2021 Sep 29. doi: 10.1016/j.celrep.2021.109755

PMCID:: PMC8492961

Abstract Article

Select item 842120410.

Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu

Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680

PMCID:: PMC8421204

Abstract Article PDF–2.9M

Select item 794602511.

Genetic interaction mapping informs integrative structure determination of protein complexes

Hannes Braberg, Ignacia Echeverria, Stefan Bohn, Peter Cimermancic, Anthony Shiver, Richard Alexander, Jiewei Xu, Michael Shales, Raghuvar Dronamraju, Shuangying Jiang, Gajendradhar Dwivedi, Derek Bogdanoff, Kaitlin K. Chaung, Ruth Hüttenhain, Shuyi Wang, David Mavor, Riccardo Pellarin, Dina Schneidman, Joel S. Bader, James S. Fraser, John Morris, James E. Haber, Brian D. Strahl, Carol A. Gross, Junbiao Dai, Jef D. Boeke, Andrej Sali, Nevan J. Krogan

Science. Author manuscript; available in PMC 2021 Jun 11.

Published in final edited form as: Science. 2020 Dec 11; 370(6522): eaaz4910. doi: 10.1126/science.aaz4910

PMCID:: PMC7946025

Abstract Article PDF–3.4M

Select item 771875112.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 649933013.

The Set1 complex is dimeric and acts with Jhd2 demethylation to convey symmetrical H3K4 trimethylation

Rupam Choudhury, Sukhdeep Singh, Senthil Arumugam, Assen Roguev, A. Francis Stewart

Genes Dev. 2019 May 1; 33(9-10): 550–564. doi: 10.1101/gad.322222.118

PMCID:: PMC6499330

Abstract Article PDF–12M

Select item 626545714.

Crosstalk among Set1 complex subunits involved in H2B ubiquitylation-dependent H3K4 methylation

Jongcheol Jeon, Robert K McGinty, Tom W Muir, Jung-Ae Kim, Jaehoon Kim

Nucleic Acids Res. 2018 Nov 30; 46(21): 11129–11143. Published online 2018 Oct 16. doi: 10.1093/nar/gky920

PMCID:: PMC6265457

Abstract Article PDF–3.8M

Select item 625871015.

Architecture and subunit arrangement of the complete Saccharomyces cerevisiae COMPASS complex

Yanxing Wang, Zhanyu Ding, Xiangyang Liu, Yu Bao, Min Huang, Catherine C. L. Wong, Xiaoyu Hong, Yao Cong

Sci Rep. 2018; 8: 17405. Published online 2018 Nov 27. doi: 10.1038/s41598-018-35609-8

PMCID:: PMC6258710

Abstract Article PDF–2.2M

Select item 621571316.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

Select item 612638417.

Cell Lysate Microarray for Mapping the Network of Genetic Regulators for Histone Marks

Li Cheng, Cheng-xi Liu, Shuangying Jiang, Sha Hou, Jin-guo Huang, Zi-qing Chen, Yang-yang Sun, Huan Qi, He-wei Jiang, Jing-fang Wang, Yi-ming Zhou, Daniel M. Czajkowsky, Junbiao Dai, Sheng-ce Tao

Mol Cell Proteomics. 2018 Sep; 17(9): 1720–1736. Published online 2018 Jun 5. doi: 10.1074/mcp.RA117.000550

PMCID:: PMC6126384

Abstract Article PDF–4.2M

Select item 610894018.

Crystal Structure of the COMPASS H3K4 Methyltransferase Catalytic Module

Peter L. Hsu, Heng Li, Ho-Tak Lau, Calvin Leonen, Abhinav Dhall, Shao-En Ong, Champak Chatterjee, Ning Zheng

Cell. Author manuscript; available in PMC 2019 Aug 23.

Published in final edited form as: Cell. 2018 Aug 23; 174(5): 1106–1116.e9. Published online 2018 Aug 9. doi: 10.1016/j.cell.2018.06.038

PMCID:: PMC6108940

Abstract Article PDF–1.2M

Select item 610893619.

Structure and conformational dynamics of a COMPASS histone H3K4 methyltransferase complex

Qianhui Qu, Yohhei Takahashi, Yidai Yang, Hongli Hu, Yan Zhang, Joseph S. Brunzelle, Jean-Francois Couture, Ali Shilatifard, Georgios Skiniotis

Cell. Author manuscript; available in PMC 2019 Aug 23.

Published in final edited form as: Cell. 2018 Aug 23; 174(5): 1117–1126.e12. Published online 2018 Aug 9. doi: 10.1016/j.cell.2018.07.020

PMCID:: PMC6108936

Abstract Article PDF–1.2M

Select item 600579720.

Single-step purification of intrinsic protein complexes in Saccharomyces cerevisiae using regenerable calmodulin resin

Urvi Bhojoo, Kyle K. Biggar

MethodsX. 2018; 5: 613–619. Published online 2018 Jun 12. doi: 10.1016/j.mex.2018.06.005

PMCID:: PMC6005797

Abstract Article PDF–703K

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