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Items: 1 to 20 of 27

1.
Multi-signal regulation of the GSK-3β homolog Rim11 controls meiosis entry in budding yeast
Johanna Kociemba, Andreas Christ Sølvsten Jørgensen, Nika Tadić, Anthony Harris, Theodora Sideri, Wei Yee Chan, Fairouz Ibrahim, Elçin Ünal, Mark Skehel, Vahid Shahrezaei, Orlando Argüello-Miranda, Folkert Jacobus van Werven
EMBO J. 2024 Aug; 43(15): 3256–3286. Published online 2024 Jun 17. doi: 10.1038/s44318-024-00149-7
PMCID:
PMC11294583
AbstractArticlePDF–5.1M
2.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
3.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
4.
Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress
Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman
Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1
PMCID:
PMC10521137
AbstractArticlePDF–4.0M
5.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
6.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
7.
Genetic Analysis of the Hsm3 Protein Function in Yeast Saccharomyces cerevisiae NuB4 Complex
Tatiyana A. Evstyukhina, Elena A. Alekseeva, Dmitriy V. Fedorov, Vyacheslav T. Peshekhonov, Vladimir G. Korolev
Genes (Basel) 2021 Jul; 12(7): 1083. Published online 2021 Jul 17. doi: 10.3390/genes12071083
PMCID:
PMC8307810
AbstractArticlePDF–2.6M
8.
FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation
He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li
Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312
PMCID:
PMC8191775
AbstractArticlePDF–3.0M
9.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII
M. Johnston, L. Hillier, L. Riles, other members of the Genome Sequencing Center, K. Albermann, B. André, W. Ansorge, V. Benes, M. Brückner, H. Delius, E. Dubois, A. Düsterhöft, K.-D. Entian, M. Floeth, A. Goffeau, U. Hebling, K. Heumann, D. Heuss-Neitzel, H. Hilbert, F. Hilger, K. Kleine, P. Kötter, E. J. Louis, F. Messenguy, H. W. Mewes, T. Miosga, D. Möstl, S. Müller-Auer, U. Nentwich, B. Obermaier, E. Piravandi, T. M. Pohl, D. Portetelle, B. Purnelle, S. Rechmann, M. Rieger, M. Rinke, M. Rose, M. Scharfe, B. Scherens, P. Scholler, C. Schwager, S. Schwarz, A. P. Underwood, L. A. Urrestarazu, M. Vandenbol, P. Verhasselt, F. Vierendeels, M Voet, G. Volckaert, H. Voss, R. Wambutt, E. Wedler, H. Wedler, F. K. Zimmermann, A. Zollner, J. Hani, J. D. Hoheisel
Nature. Author manuscript; available in PMC 2019 Jul 9.
Published in final edited form as: Nature. 1997 May 29; 387(6632 Suppl): 87–90.
PMCID:
PMC6615710
AbstractArticlePDF–424K
10.
Functional Analysis of Hif1 Histone Chaperone in Saccharomyces cerevisiae
Nora S. Dannah, Syed Nabeel-Shah, Christoph F. Kurat, Sarah A. Sabatinos, Jeffrey Fillingham
G3 (Bethesda) 2018 Jun; 8(6): 1993–2006. Published online 2018 Apr 16. doi: 10.1534/g3.118.200229
PMCID:
PMC5982827
AbstractArticlePDF–2.2M
11.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
12.
Comprehensive analysis of interacting proteins and genome-wide location studies of the Sas3-dependent NuA3 histone acetyltransferase complex
Sara Vicente-Muñoz, Paco Romero, Lorena Magraner-Pardo, Celia P. Martinez-Jimenez, Vicente Tordera, Mercè Pamblanco
FEBS Open Bio. 2014; 4: 996–1006. Published online 2014 Nov 8. doi: 10.1016/j.fob.2014.11.001
PMCID:
PMC4248121
AbstractArticlePDF–1.8M
13.
The Yeast Histone Chaperone Hif1p Functions with RNA in Nucleosome Assembly
Amy R. Knapp, Huanyu Wang, Mark R. Parthun
PLoS One. 2014; 9(7): e100299. Published online 2014 Jul 29. doi: 10.1371/journal.pone.0100299
PMCID:
PMC4114455
AbstractArticlePDF–1.1M
14.
The cotranslational function of ribosome-associated Hsp70 in eukaryotic protein homeostasis
Felix Willmund, Marta del Alamo, Sebastian Pechmann, Taotao Chen, Veronique Albanese, Eric B. Dammer, Junmin Peng, Judith Frydman
Cell. Author manuscript; available in PMC 2014 Jan 17.
Published in final edited form as: Cell. 2013 Jan 17; 152(1-2): 196–209. doi: 10.1016/j.cell.2012.12.001
PMCID:
PMC3553497
AbstractArticlePDF–5.1M
15.
Multiplex assay for condition-dependent changes in protein–protein interactions
Ulrich Schlecht, Molly Miranda, Sundari Suresh, Ronald W. Davis, Robert P. St.Onge
Proc Natl Acad Sci U S A. 2012 Jun 5; 109(23): 9213–9218. Published online 2012 May 21. doi: 10.1073/pnas.1204952109
PMCID:
PMC3384208
AbstractArticlePDF–2.9M
16.
Characterization of a Highly Conserved Histone Related Protein, Ydl156w, and Its Functional Associations Using Quantitative Proteomic Analyses
Joshua M. Gilmore, Mihaela E. Sardiu, Swaminathan Venkatesh, Brent Stutzman, Allison Peak, Chris W. Seidel, Jerry L. Workman, Laurence Florens, Michael P. Washburn
Mol Cell Proteomics. 2012 Apr; 11(4): M111.011544. Published online 2011 Dec 22. doi: 10.1074/mcp.M111.011544
PMCID:
PMC3322567
AbstractArticlePDF–2.3M
17.
A Barcode Screen for Epigenetic Regulators Reveals a Role for the NuB4/HAT-B Histone Acetyltransferase Complex in Histone Turnover
Kitty F. Verzijlbergen, Tibor van Welsem, Daoud Sie, Tineke L. Lenstra, Daniel J. Turner, Frank C. P. Holstege, Ron M. Kerkhoven, Fred van Leeuwen
PLoS Genet. 2011 Oct; 7(10): e1002284. Published online 2011 Oct 6. doi: 10.1371/journal.pgen.1002284
PMCID:
PMC3188528
AbstractArticlePDF–1019K
18.
Nuclear Hat1p Complex (NuB4) Components Participate in DNA Repair-linked Chromatin Reassembly
Zhongqi Ge, Huanyu Wang, Mark R. Parthun
J Biol Chem. 2011 May 13; 286(19): 16790–16799. Published online 2011 Mar 18. doi: 10.1074/jbc.M110.216846
PMCID:
PMC3089522
AbstractArticlePDF–1.5M
19.
An E3 ubiquitin ligase prevents ectopic localization of the centromeric histone H3 variant via the centromere targeting domain
Prerana Ranjitkar, Maximilian O. Press, Xianhua Yi, Richard Baker, Michael J. MacCoss, Sue Biggins
Mol Cell. Author manuscript; available in PMC 2011 Nov 12.
Published in final edited form as: Mol Cell. 2010 Nov 12; 40(3): 455–464. doi: 10.1016/j.molcel.2010.09.025
PMCID:
PMC2995698
AbstractArticlePDF–1.2M
20.
The Program for Processing Newly-synthesized Histones H3.1 and H4
Eric I. Campos, Jeffrey Fillingham, Guohong Li, Haiyan Zheng, Philipp Voigt, Wei-Hung W. Kuo, Harshika Seepany, Zhonghua Gao, Loren A. Day, Jack F. Greenblatt, Danny Reinberg
Nat Struct Mol Biol. Author manuscript; available in PMC 2011 May 1.
Published in final edited form as: Nat Struct Mol Biol. 2010 Nov; 17(11): 1343–1351. Published online 2010 Oct 17. doi: 10.1038/nsmb.1911
PMCID:
PMC2988979
AbstractArticlePDF–1.1M

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