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Items: 16

1.
The DEAD-box protein Dbp6 is an ATPase and RNA annealase interacting with the peptidyl transferase center (PTC) of the ribosome
Ali Khreiss, Régine Capeyrou, Simon Lebaron, Benjamin Albert, Katherine E Bohnsack, Markus T Bohnsack, Yves Henry, Anthony K Henras, Odile Humbert
Nucleic Acids Res. 2023 Jan 25; 51(2): 744–764. Published online 2023 Jan 5. doi: 10.1093/nar/gkac1196
PMCID:
PMC9881158
AbstractArticlePDF–4.1M
2.
Rbp95 binds to 25S rRNA helix H95 and cooperates with the Npa1 complex during early pre-60S particle maturation
Priya Bhutada, Sébastien Favre, Mariam Jaafar, Jutta Hafner, Laura Liesinger, Stefan Unterweger, Karin Bischof, Barbara Darnhofer, Devanarayanan Siva Sankar, Gerald Rechberger, Raghida Abou Merhi, Simon Lebaron, Ruth Birner-Gruenberger, Dieter Kressler, Anthony K Henras, Brigitte Pertschy
Nucleic Acids Res. 2022 Sep 23; 50(17): 10053–10077. Published online 2022 Aug 26. doi: 10.1093/nar/gkac724
PMCID:
PMC9508819
AbstractArticlePDF–16M
3.
Nuclear fate of yeast snoRNA is determined by co-transcriptional Rnt1 cleavage
Pawel Grzechnik, Sylwia A. Szczepaniak, Somdutta Dhir, Anna Pastucha, Hannah Parslow, Zaneta Matuszek, Hannah E. Mischo, Joanna Kufel, Nicholas J. Proudfoot
Nat Commun. 2018; 9: 1783. Published online 2018 May 3. doi: 10.1038/s41467-018-04094-y
PMCID:
PMC5934358
AbstractArticlePDF–3.7M
4.
Target selection by natural and redesigned PUF proteins
Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens
Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112
PMCID:
PMC4703012
AbstractArticlePDF–1.3M
5.
A Cytosolic Network Suppressing Mitochondria-Mediated Proteostatic Stress and Cell Death
Xiaowen Wang, Xin Jie Chen
Nature. Author manuscript; available in PMC 2016 Feb 27.
Published in final edited form as: Nature. 2015 Aug 27; 524(7566): 481–484. Published online 2015 Jul 20. doi: 10.1038/nature14859
PMCID:
PMC4582408
AbstractArticlePDF–2.3M
6.
Transcriptome-wide mapping reveals widespread dynamic regulated pseudouridylation of ncRNA and mRNA
Schraga Schwartz, Douglas A. Bernstein, Maxwell R. Mumbach, Marko Jovanovic, Rebecca H. Herbst, Brian X. León-Ricardo, Jesse M. Engreitz, Mitchell Guttman, Rahul Satija, Eric S. Lander, Gerald Fink, Aviv Regev
Cell. Author manuscript; available in PMC 2015 Sep 25.
Published in final edited form as: Cell. 2014 Sep 25; 159(1): 148–162. Published online 2014 Sep 11. doi: 10.1016/j.cell.2014.08.028
PMCID:
PMC4180118
AbstractArticlePDF–1.6M
7.
Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-Poly(A) Termination Pathway: Nrd1, Nab3, and Sen1
Tyler J. Creamer, Miranda M. Darby, Nuttara Jamonnak, Paul Schaughency, Haiping Hao, Sarah J. Wheelan, Jeffry L. Corden
PLoS Genet. 2011 Oct; 7(10): e1002329. Published online 2011 Oct 20. doi: 10.1371/journal.pgen.1002329
PMCID:
PMC3197677
AbstractArticlePDF–1.3M
8.
New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA
Dorota Piekna-Przybylska, Wayne A. Decatur, Maurille J. Fournier
RNA. 2007 Mar; 13(3): 305–312. doi: 10.1261/rna.373107
PMCID:
PMC1800513
AbstractArticlePDF–745K
9.
The Helicase Has1p Is Required for snoRNA Release from Pre-rRNA
Xue-hai Liang, Maurille J. Fournier
Mol Cell Biol. 2006 Oct; 26(20): 7437–7450. Published online 2006 Aug 14. doi: 10.1128/MCB.00664-06
PMCID:
PMC1636851
AbstractArticlePDF–607K
10.
The complete set of H/ACA snoRNAs that guide rRNA pseudouridylations in Saccharomyces cerevisiae
CLAIRE TORCHET, GWENAËL BADIS, FRÉDÉRIC DEVAUX, GINNY COSTANZO, MICHEL WERNER, ALAIN JACQUIER
RNA. 2005 Jun; 11(6): 928–938. doi: 10.1261/rna.2100905
PMCID:
PMC1370777
AbstractArticlePDF–592K
11.
Cotranscriptional Recruitment of the Pseudouridylsynthetase Cbf5p and of the RNA Binding Protein Naf1p during H/ACA snoRNP Assembly
Pok Kwan Yang, Coralie Hoareau, Carine Froment, Bernard Monsarrat, Yves Henry, Guillaume Chanfreau
Mol Cell Biol. 2005 Apr; 25(8): 3295–3304. doi: 10.1128/MCB.25.8.3295-3304.2005
PMCID:
PMC1069627
AbstractArticlePDF–414K
12.
A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNA.
D Tollervey
EMBO J. 1987 Dec 20; 6(13): 4169–4175. doi: 10.1002/j.1460-2075.1987.tb02763.x
PMCID:
PMC553900
SummaryPage BrowsePDF–1.8M
13.
Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome
Peter Schattner, Wayne A. Decatur, Carrie A. Davis, Manuel Ares, Jr, Maurille J. Fournier, Todd M. Lowe
Nucleic Acids Res. 2004; 32(14): 4281–4296. Published online 2004 Aug 11. doi: 10.1093/nar/gkh768
PMCID:
PMC514388
AbstractArticlePDF–709K
14.
Genetic analysis of small nuclear RNAs in Saccharomyces cerevisiae: viable sextuple mutant.
R Parker, T Simmons, E O Shuster, P G Siliciano, C Guthrie
Mol Cell Biol. 1988 Aug; 8(8): 3150–3159. doi: 10.1128/mcb.8.8.3150
PMCID:
PMC363543
SummaryPage BrowsePDF–2.5M
15.
The box H+ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase
Denis L.J. Lafontaine, Cécile Bousquet-Antonelli, Yves Henry, Michèle Caizergues-Ferrer, David Tollervey
Genes Dev. 1998 Feb 15; 12(4): 527–537. doi: 10.1101/gad.12.4.527
PMCID:
PMC316522
AbstractArticlePDF–1.1M
16.
A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae.
D A Samarsky, M J Fournier
Nucleic Acids Res. 1999 Jan 1; 27(1): 161–164. doi: 10.1093/nar/27.1.161
PMCID:
PMC148121
SummaryPDF–517K

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