PMC Links for GEO Profiles (Select 34387689) - PMC

Chung-Shu Yeh, Shang-Lin Chang, Jui-Hui Chen, Hsuan-Kai Wang, Yue-Chang Chou, Chun-Hsiung Wang, Shih-Hsin Huang, Amy Larson, Jeffrey A Pleiss, Wei-Hau Chang, Tien-Hsien Chang

Nucleic Acids Res. 2017 Sep 19; 45(16): 9679–9693. Published online 2017 Jul 13. doi: 10.1093/nar/gkx608

PMCID:: PMC5766165

Abstract Article PDF–3.0M

Select item 56487546.

CryoEM structure of Saccharomyces cerevisiae U1 snRNP offers insight into alternative splicing

Xueni Li, Shiheng Liu, Jiansen Jiang, Lingdi Zhang, Sara Espinosa, Ryan C. Hill, Kirk C. Hansen, Z. Hong Zhou, Rui Zhao

Nat Commun. 2017; 8: 1035. Published online 2017 Oct 19. doi: 10.1038/s41467-017-01241-9

Correction in:: Nat Commun. 2018; 9: 1495.

PMCID:: PMC5648754

Abstract Article PDF–5.7M

Select item 54646767.

Specialized box C/D snoRNPs act as antisense guides to target RNA base acetylation

Sunny Sharma, Jun Yang, Rob van Nues, Peter Watzinger, Peter Kötter, Denis L. J. Lafontaine, Sander Granneman, Karl-Dieter Entian

PLoS Genet. 2017 May; 13(5): e1006804. Published online 2017 May 24. doi: 10.1371/journal.pgen.1006804

PMCID:: PMC5464676

Abstract Article PDF–30M

Select item 48019438.

Pseudouridines in U2 snRNA stimulate the ATPase activity of Prp5 during spliceosome assembly

Guowei Wu, Hironori Adachi, Junhui Ge, David Stephenson, Charles C Query, Yi‐Tao Yu

EMBO J. 2016 Mar 15; 35(6): 654–667. Published online 2016 Feb 12. doi: 10.15252/embj.201593113

PMCID:: PMC4801943

Abstract Article PDF–1.2M

Select item 47327529.

Cth2 Protein Mediates Early Adaptation of Yeast Cells to Oxidative Stress Conditions

Laia Castells-Roca, Jordi Pijuan, Francisco Ferrezuelo, Gemma Bellí, Enrique Herrero

PLoS One. 2016; 11(1): e0148204. Published online 2016 Jan 29. doi: 10.1371/journal.pone.0148204

PMCID:: PMC4732752

Abstract Article PDF–1.6M

Select item 470301210.

Target selection by natural and redesigned PUF proteins

Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112

PMCID:: PMC4703012

Abstract Article PDF–1.3M

Select item 428156711.

A novel mechanism for Prp5 function in prespliceosome formation and proofreading the branch site sequence

Wen-Wei Liang, Soo-Chen Cheng

Genes Dev. 2015 Jan 1; 29(1): 81–93. doi: 10.1101/gad.253708.114

PMCID:: PMC4281567

Abstract Article PDF–910K

Select item 413661112.

Quality control of assembly-defective U1 snRNAs by decapping and 5′-to-3′ exonucleolytic digestion

Siddharth Shukla, Roy Parker

Proc Natl Acad Sci U S A. 2014 Aug 12; 111(32): E3277–E3286. Published online 2014 Jul 28. doi: 10.1073/pnas.1412614111

PMCID:: PMC4136611

Abstract Article PDF–1.4M

Select item 398566813.

Structure-function analysis of the Yhc1 subunit of yeast U1 snRNP and genetic interactions of Yhc1 with Mud2, Nam8, Mud1, Tgs1, U1 snRNA, SmD3 and Prp28

Beate Schwer, Stewart Shuman

Nucleic Acids Res. 2014 Apr; 42(7): 4697–4711. Published online 2014 Jan 31. doi: 10.1093/nar/gku097

PMCID:: PMC3985668

Abstract Article PDF–10M

Select item 375362414.

Structure-function analysis of the 5′ end of yeast U1 snRNA highlights genetic interactions with the Msl5•Mud2 branchpoint-binding complex and other spliceosome assembly factors

Beate Schwer, Jonathan Chang, Stewart Shuman

Nucleic Acids Res. 2013 Aug; 41(15): 7485–7500. Published online 2013 Jun 10. doi: 10.1093/nar/gkt490

PMCID:: PMC3753624

Abstract Article PDF–7.4M

Select item 363773515.

Single-molecule colocalization FRET evidence that spliceosome activation precedes stable approach of 5′ splice site and branch site

Daniel J. Crawford, Aaron A. Hoskins, Larry J. Friedman, Jeff Gelles, Melissa J. Moore

Proc Natl Acad Sci U S A. 2013 Apr 23; 110(17): 6783–6788. Published online 2013 Apr 8. doi: 10.1073/pnas.1219305110

PMCID:: PMC3637735

Abstract Article PDF–1.0M

Select item 361673216.

Comprehensive in vivo RNA-binding site analyses reveal a role of Prp8 in spliceosomal assembly

Xueni Li, Wenzheng Zhang, Tao Xu, Jolene Ramsey, Lingdi Zhang, Ryan Hill, Kirk C. Hansen, Jay R. Hesselberth, Rui Zhao

Nucleic Acids Res. 2013 Apr; 41(6): 3805–3818. Published online 2013 Feb 6. doi: 10.1093/nar/gkt062

PMCID:: PMC3616732

Abstract Article PDF–2.6M

Select item 345440817.

Cwc24p Is a General Saccharomyces cerevisiae Splicing Factor Required for the Stable U2 snRNP Binding to Primary Transcripts

Patricia P. Coltri, Carla C. Oliveira

PLoS One. 2012; 7(9): e45678. Published online 2012 Sep 24. doi: 10.1371/journal.pone.0045678

PMCID:: PMC3454408

Abstract Article PDF–506K

Select item 322212518.

Cotranscriptional spliceosome assembly and splicing are independent of the Prp40p WW domain

Janina Görnemann, Charlotte Barrandon, Katja Hujer, Berthold Rutz, Guillaume Rigaut, Kimberly M. Kotovic, Céline Faux, Karla M. Neugebauer, Bertrand Séraphin

RNA. 2011 Dec; 17(12): 2119–2129. doi: 10.1261/rna.02646811