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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 92098113.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 78158744.

Increasing glycolysis by deletion of kcs1 and arg82 improved S-adenosyl-l-methionine production in Saccharomyces cerevisiae

Hailong Chen, Nianqing Zhu, Yan Wang, Xinxin Gao, Yuhe Song, Jia Zheng, Jiaping Peng, Xin Zhang

AMB Express. 2021; 11: 20. Published online 2021 Jan 19. doi: 10.1186/s13568-021-01179-8

PMCID:: PMC7815874

Abstract Article PDF–2.5M

Select item 75874325.

IP₇-SPX Domain Interaction Controls Fungal Virulence by Stabilizing Phosphate Signaling Machinery

Desmarini Desmarini, Sophie Lev, David Furkert, Ben Crossett, Adolfo Saiardi, Keren Kaufman-Francis, Cecilia Li, Tania C. Sorrell, Lorna Wilkinson-White, Jacqueline Matthews, Dorothea Fiedler, Julianne Teresa Djordjevic

mBio. 2020 Sep-Oct; 11(5): e01920-20. Published online 2020 Oct 20. doi: 10.1128/mBio.01920-20

PMCID:: PMC7587432

Abstract Article PDF–3.0M

Select item 61983296.

Inositol phosphate multikinase dependent transcriptional control

Ace J. Hatch, Audrey R. Odom, John D. York

Adv Biol Regul. Author manuscript; available in PMC 2018 Oct 23.

Published in final edited form as: Adv Biol Regul. 2017 May; 64: 9–19. Published online 2017 Mar 21. doi: 10.1016/j.jbior.2017.03.001

PMCID:: PMC6198329

Abstract Article PDF–1.2M

Select item 60349027.

Inositol polyphosphates regulate and predict yeast pseudohyphal growth phenotypes

Kaitlyn L. Norman, Christian A. Shively, Amberlene J. De La Rocha, Nebibe Mutlu, Sukanya Basu, Paul J. Cullen, Anuj Kumar

PLoS Genet. 2018 Jun; 14(6): e1007493. Published online 2018 Jun 25. doi: 10.1371/journal.pgen.1007493

PMCID:: PMC6034902

Abstract Article PDF–5.4M

Select item 57653598.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 56359349.

[PSI+] prion propagation is controlled by inositol polyphosphates

Reed B. Wickner, Amy C. Kelly, Evgeny E. Bezsonov, Herman K. Edskes

Proc Natl Acad Sci U S A. 2017 Oct 3; 114(40): E8402–E8410. Published online 2017 Sep 18. doi: 10.1073/pnas.1714361114

PMCID:: PMC5635934

Abstract Article PDF–927K

Select item 547375510.

Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28

Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink

G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317

Correction in:: G3 (Bethesda). 2019 Aug; 9(8): 2787.

PMCID:: PMC5473755

Abstract Article PDF–2.7M

Select item 520924511.

A network of conserved synthetic lethal interactions for exploration of precision cancer therapy

Rohith Srivas, John Paul Shen, Chih Cheng Yang, Su Ming Sun, Jianfeng Li, Andrew M. Gross, James Jensen, Katherine Licon, Ana Bojorquez-Gomez, Kristin Klepper, Justin Huang, Daniel Pekin, Jia L. Xu, Huwate Yeerna, Vignesh Sivaganesh, Leonie Kollenstart, Haico van Attikum, Pedro Aza-Blanc, Robert W. Sobol, Trey Ideker

Mol Cell. Author manuscript; available in PMC 2017 Aug 4.

Published in final edited form as: Mol Cell. 2016 Aug 4; 63(3): 514–525. Published online 2016 Jul 21. doi: 10.1016/j.molcel.2016.06.022

PMCID:: PMC5209245

Abstract Article PDF–1.6M

Select item 508651912.

Combined Action of Histone Reader Modules Regulates NuA4 Local Acetyltransferase Function but Not Its Recruitment on the Genome

Anne-Lise Steunou, Myriam Cramet, Dorine Rossetto, Maria J. Aristizabal, Nicolas Lacoste, Simon Drouin, Valérie Côté, Eric Paquet, Rhea T. Utley, Nevan Krogan, François Robert, Michael S. Kobor, Jacques Côté

Mol Cell Biol. 2016 Nov 15; 36(22): 2768–2781. Prepublished online 2016 Aug 22. Published online 2016 Oct 28. doi: 10.1128/MCB.00112-16

PMCID:: PMC5086519

Abstract Article PDF–2.3M

Select item 504769313.

Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets

John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen

Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374

PMCID:: PMC5047693

Abstract Article

Select item 480123814.

Functions for diverse metabolic activities in heterochromatin

Xue Bessie Su, Lorraine Pillus

Proc Natl Acad Sci U S A. 2016 Mar 15; 113(11): E1526–E1535. Published online 2016 Mar 2. doi: 10.1073/pnas.1518707113

PMCID:: PMC4801238

Abstract Article PDF–1.5M

Select item 455879215.

Polyglutamine toxicity in yeast induces metabolic alterations and mitochondrial defects

Katharina Papsdorf, Christoph J. O. Kaiser, Adrian Drazic, Stefan W. Grötzinger, Carmen Haeßner, Wolfgang Eisenreich, Klaus Richter

BMC Genomics. 2015; 16(1): 662. Published online 2015 Sep 3. doi: 10.1186/s12864-015-1831-7

PMCID:: PMC4558792

Abstract Article PDF–3.1M

Select item 396249016.

The Yeast Ess1 Prolyl Isomerase Controls Swi6 and Whi5 Nuclear Localization

David Atencio, Cassandra Barnes, Thomas M. Duncan, Ian M. Willis, Steven D. Hanes

G3 (Bethesda) 2014 Mar; 4(3): 523–537. Published online 2014 Jan 27. doi: 10.1534/g3.113.008763

PMCID:: PMC3962490

Abstract Article PDF–2.3M

Select item 378471217.

Yeast Phospholipase C Is Required for Normal Acetyl-CoA Homeostasis and Global Histone Acetylation

Luciano Galdieri, Jennifer Chang, Swati Mehrotra, Ales Vancura

J Biol Chem. 2013 Sep 27; 288(39): 27986–27998. Published online 2013 Aug 2. doi: 10.1074/jbc.M113.492348

PMCID:: PMC3784712

Abstract Article PDF–1.9M

Select item 367235918.

Inositol Pyrophosphates Regulate Cell Growth and the Environmental Stress Response by Activating the HDAC Rpd3L

Jeremy Worley, Xiangxia Luo, Andrew P Capaldi

Cell Rep. Author manuscript; available in PMC 2013 Jun 4.

Published in final edited form as: Cell Rep. 2013 May 30; 3(5): 1476–1482. Published online 2013 May 2. doi: 10.1016/j.celrep.2013.03.043

PMCID:: PMC3672359

Abstract Article PDF–1.1M

Select item 353328619.

Lysosomal disruption preferentially targets acute myeloid leukemia cells and progenitors

Mahadeo A. Sukhai, Swayam Prabha, Rose Hurren, Angela C. Rutledge, Anna Y. Lee, Shrivani Sriskanthadevan, Hong Sun, Xiaoming Wang, Marko Skrtic, Ayesh Seneviratne, Maria Cusimano, Bozhena Jhas, Marcela Gronda, Neil MacLean, Eunice E. Cho, Paul A. Spagnuolo, Sumaiya Sharmeen, Marinella Gebbia, Malene Urbanus, Kolja Eppert, Dilan Dissanayake, Alexia Jonet, Alexandra Dassonville-Klimpt, Xiaoming Li, Alessandro Datti, Pamela S. Ohashi, Jeff Wrana, Ian Rogers, Pascal Sonnet, William Y. Ellis, Seth J. Corey, Connie Eaves, Mark D. Minden, Jean C.Y. Wang, John E. Dick, Corey Nislow, Guri Giaever, Aaron D. Schimmer

J Clin Invest. 2013 Jan 2; 123(1): 315–328. Published online 2012 Dec 3. doi: 10.1172/JCI64180

PMCID:: PMC3533286

Abstract Article PDF–2.1M

Select item 348810320.

Arginine Transcriptional Response Does Not Require Inositol Phosphate Synthesis

Daniel Bosch, Adolfo Saiardi

J Biol Chem. 2012 Nov 2; 287(45): 38347–38355. Published online 2012 Sep 19. doi: 10.1074/jbc.M112.384255

PMCID:: PMC3488103

Abstract Article PDF–1.4M

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