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Items: 19

1.
CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing
Doreen I. Lugano, Lindsey N. Barrett, Dale Chaput, Margaret A. Park, Sandy D. Westerheide
RNA Biol. 2024; 21(1): 1–11. Published online 2023 Dec 21. doi: 10.1080/15476286.2023.2289707
PMCID:
PMC10761121
AbstractArticlePDF–2.5M
2.
Akkermansia muciniphila Cell-Free Supernatant Improves Glucose and Lipid Metabolisms in Caenorhabditis elegans
Zhong-Qin Wu, Xin-Ming Chen, Hui-Qin Ma, Ke Li, Yuan-Liang Wang, Zong-Jun Li
Nutrients. 2023 Apr; 15(7): 1725. Published online 2023 Mar 31. doi: 10.3390/nu15071725
PMCID:
PMC10097305
AbstractArticlePDF–2.1M
3.
An anchored experimental design and meta-analysis approach to address batch effects in large-scale metabolomics
Amanda O. Shaver, Brianna M. Garcia, Goncalo J. Gouveia, Alison M. Morse, Zihao Liu, Carter K. Asef, Ricardo M. Borges, Franklin E. Leach, III, Erik C. Andersen, I. Jonathan Amster, Facundo M. Fernández, Arthur S. Edison, Lauren M. McIntyre
Front Mol Biosci. 2022; 9: 930204. Published online 2022 Nov 9. doi: 10.3389/fmolb.2022.930204
PMCID:
PMC9682135
AbstractArticlePDF–3.0M
4.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
5.
A modified TurboID approach identifies tissue-specific centriolar components in C. elegans
Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann
PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150
Correction in:
PLoS Genet. 2023 Feb; 19(2): e1010645.
PMCID:
PMC9020716
AbstractArticlePDF–2.0M
6.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
7.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
8.
Host CDK-1 and formin mediate microvillar effacement induced by enterohemorrhagic Escherichia coli
Cheng-Rung Huang, Cheng-Ju Kuo, Chih-Wen Huang, Yu-Ting Chen, Bang-Yu Liu, Chung-Ta Lee, Po-Lin Chen, Wen-Tsan Chang, Yun-Wen Chen, Tzer-Min Lee, Hui-Chen Hsieh, Chang-Shi Chen
Nat Commun. 2021; 12: 90. Published online 2021 Jan 4. doi: 10.1038/s41467-020-20355-1
PMCID:
PMC7782584
AbstractArticlePDF–8.4M
9.
The conserved histone chaperone LIN‐53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans
Stefanie Müthel, Bora Uyar, Mei He, Anne Krause, Burcu Vitrinel, Selman Bulut, Djordje Vasiljevic, Iris Marchal, Stefan Kempa, Altuna Akalin, Baris Tursun
Aging Cell. 2019 Dec; 18(6): e13012. Published online 2019 Aug 9. doi: 10.1111/acel.13012
PMCID:
PMC6826145
AbstractArticlePDF–3.0M
10.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
11.
From the Cover: Arsenite Uncouples Mitochondrial Respiration and Induces a Warburg-like Effect in Caenorhabditis elegans
Anthony L. Luz, Tewodros R. Godebo, Dhaval P. Bhatt, Olga R. Ilkayeva, Laura L. Maurer, Matthew D. Hirschey, Joel N. Meyer
Toxicol Sci. 2016 Aug; 152(2): 349–362. Published online 2016 Jun 20. doi: 10.1093/toxsci/kfw093
Correction in:
Toxicol Sci. 2016 Nov; 154(1): 195.
PMCID:
PMC4960910
AbstractArticlePDF–706K
12.
Reciprocal Changes in Phosphoenolpyruvate Carboxykinase and Pyruvate Kinase with Age Are a Determinant of Aging in Caenorhabditis elegans
Yiyuan Yuan, Parvin Hakimi, Clara Kao, Allison Kao, Ruifu Liu, Allison Janocha, Andrea Boyd-Tressler, Xi Hang, Hanna Alhoraibi, Erin Slater, Kevin Xia, Pengxiu Cao, Quinn Shue, Tsui-Ting Ching, Ao-Lin Hsu, Serpil C. Erzurum, George R. Dubyak, Nathan A. Berger, Richard W. Hanson, Zhaoyang Feng
J Biol Chem. 2016 Jan 15; 291(3): 1307–1319. Published online 2015 Dec 2. doi: 10.1074/jbc.M115.691766
PMCID:
PMC4714217
AbstractArticlePDF–2.5M
13.
Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis
E D Crawford, J E Seaman, A E Barber, II, D C David, P C Babbitt, A L Burlingame, J A Wells
Cell Death Differ. 2012 Dec; 19(12): 2040–2048. Published online 2012 Aug 24. doi: 10.1038/cdd.2012.99
PMCID:
PMC3504717
AbstractArticlePDF–932K
14.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
15.
A protein domain-based interactome network for C. elegans early embryogenesis
Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D. Mul, Diederik van de Peut, Maxime Devos, Nicolas Simonis, Muhammed A. Yildirim, Murat Cokol, Huey-Ling Kao, Anne-Sophie de Smet, Haidong Wang, Anne-Lore Schlaitz, Tong Hao, Stuart Milstein, Changyu Fan, Mike Tipsword, Kevin Drew, Matilde Galli, Kahn Rhrissorrakrai, David Drechsel, Daphne Koller, Frederick P. Roth, Lilia M. Iakoucheva, A. Keith Dunker, Richard Bonneau, Kristin C. Gunsalus, David E. Hill, Fabio Piano, Jan Tavernier, Sander van den Heuvel, Anthony A. Hyman, Marc Vidal
Cell. Author manuscript; available in PMC 2009 Aug 8.
Published in final edited form as: Cell. 2008 Aug 8; 134(3): 534–545. doi: 10.1016/j.cell.2008.07.009
Correction in:
volume 151 on page 1633
PMCID:
PMC2596478
AbstractArticlePDF–4.0M
16.
Fatty Acid Desaturation and the Regulation of Adiposity in Caenorhabditis elegans
Trisha J. Brock, John Browse, Jennifer L. Watts
Genetics. 2007 Jun; 176(2): 865–875. doi: 10.1534/genetics.107.071860
PMCID:
PMC1894614
AbstractArticlePDF–1.6M
17.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M
18.
Glyceraldehyde-3-Phosphate Dehydrogenase Mediates Anoxia Response and Survival in Caenorhabditis elegans
Alexander R. Mendenhall, Bobby LaRue, Pamela A. Padilla
Genetics. 2006 Nov; 174(3): 1173–1187. doi: 10.1534/genetics.106.061390
PMCID:
PMC1667098
AbstractArticlePDF–1.0M
19.
A Caenorhabditis elegans nutrient response system partially dependent on nuclear receptor NHR-49
Marc R. Van Gilst, Haralambos Hadjivassiliou, Keith R. Yamamoto
Proc Natl Acad Sci U S A. 2005 Sep 20; 102(38): 13496–13501. Published online 2005 Sep 12. doi: 10.1073/pnas.0506234102
PMCID:
PMC1201344
AbstractArticlePDF–673K

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