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Items: 1 to 20 of 33

1.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
ArticlePDF–3.2M
2.
Transcriptional Correlates of Chronic Alcohol Neuroadaptation in Drosophila Larvae
Amanda Anqueira-González, Jenny P. Acevedo-Gonzalez, Airined Montes-Mercado, Claudia Irizarry-Hernández, Nicolás L. Fuenzalida-Uribe, Alfredo Ghezzi
Front Behav Neurosci. 2021; 15: 768694. Published online 2021 Nov 4. doi: 10.3389/fnbeh.2021.768694
PMCID:
PMC8599819
ArticlePDF–1.0M
3.
Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders
Stefano Sechi, Angela Karimpour-Ghahnavieh, Anna Frappaolo, Laura Di Francesco, Roberto Piergentili, Eugenia Schininà, Pier Paolo D’Avino, Maria Grazia Giansanti
Cells. 2021 Sep; 10(9): 2336. Published online 2021 Sep 6. doi: 10.3390/cells10092336
PMCID:
PMC8468827
ArticlePDF–4.1M
4.
Identification of Genes Involved in the Differentiation of R7y and R7p Photoreceptor Cells in Drosophila
James B. Earl, Lauren A. Vanderlinden, Thomas L. Jacobsen, John C. Aldrich, Laura M. Saba, Steven G. Britt
G3 (Bethesda) 2020 Nov; 10(11): 3949–3958. Published online 2020 Sep 24. doi: 10.1534/g3.120.401370
PMCID:
PMC7642934
ArticlePDF–1.6M
5.
The Identification and Evolutionary Trends of the Solute Carrier Superfamily in Arthropods
Shane M Denecke, Olympia Driva, Hang Ngoc Bao Luong, Panagiotis Ioannidis, Marc Linka, Ralf Nauen, Sven Geibel, John Vontas
Genome Biol Evol. 2020 Aug; 12(8): 1429–1439. Published online 2020 Jul 18. doi: 10.1093/gbe/evaa153
PMCID:
PMC7487162
ArticlePDF–1.1M
6.
Glucose Availability Alters Gene and Protein Expression of Several Newly Classified and Putative Solute Carriers in Mice Cortex Cell Culture and D. melanogaster
Mikaela M. Ceder, Emilia Lekholm, Axel Klaesson, Rekha Tripathi, Nadine Schweizer, Lydia Weldai, Sourabh Patil, Robert Fredriksson
Front Cell Dev Biol. 2020; 8: 579. Published online 2020 Jul 7. doi: 10.3389/fcell.2020.00579
PMCID:
PMC7358622
ArticlePDF–8.7M
7.
Amyotrophic Lateral Sclerosis Modifiers in Drosophila Reveal the Phospholipase D Pathway as a Potential Therapeutic Target
Mark W. Kankel, Anindya Sen, Lei Lu, Marina Theodorou, Douglas N. Dimlich, Alexander McCampbell, Christopher E. Henderson, Neil A. Shneider, Spyros Artavanis-Tsakonas
Genetics. 2020 Jul; 215(3): 747–766. Published online 2020 Apr 28. doi: 10.1534/genetics.119.302985
PMCID:
PMC7337071
ArticlePDF–2.6M
8.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
ArticlePDF–3.6M
9.
Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila
Hagar Meltzer, Efrat Marom, Idan Alyagor, Oded Mayseless, Victoria Berkun, Netta Segal-Gilboa, Tamar Unger, David Luginbuhl, Oren Schuldiner
Nat Commun. 2019; 10: 2113. Published online 2019 May 8. doi: 10.1038/s41467-019-10140-0
PMCID:
PMC6506539
ArticlePDF–6.5M
10.
A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion
Katarina Valoskova, Julia Biebl, Marko Roblek, Shamsi Emtenani, Attila Gyoergy, Michaela Misova, Aparna Ratheesh, Patricia Reis-Rodrigues, Kateryna Shkarina, Ida Signe Bohse Larsen, Sergey Y Vakhrushev, Henrik Clausen, Daria E Siekhaus
eLife. 2019; 8: e41801. Published online 2019 Mar 26. doi: 10.7554/eLife.41801
PMCID:
PMC6435326
ArticlePDF–4.2M
11.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
ArticlePDF–3.2M
12.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
ArticlePDF–4.0M
13.
Characteristics of 29 novel atypical solute carriers of major facilitator superfamily type: evolutionary conservation, predicted structure and neuronal co-expression
Emelie Perland, Sonchita Bagchi, Axel Klaesson, Robert Fredriksson
Open Biol. 2017 Sep; 7(9): 170142. Published online 2017 Sep 6. doi: 10.1098/rsob.170142
PMCID:
PMC5627054
ArticlePDF–1.4M
14.
Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet
Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata
Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371
PMCID:
PMC4788116
ArticlePDF–4.7M
15.
Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach
Flavio Pazos Obregón, Cecilia Papalardo, Sebastián Castro, Gustavo Guerberoff, Rafael Cantera
BMC Genomics. 2015; 16(1): 694. Published online 2015 Sep 15. doi: 10.1186/s12864-015-1888-3
PMCID:
PMC4570697
ArticlePDF–2.0M
16.
Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions
Albert J. Erives
Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1
PMCID:
PMC4568025
ArticlePDF–2.8M
17.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
ArticlePDF–2.2M
18.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
ArticlePDF–4.9M
19.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
ArticlePDF–1022K
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
ArticlePDF–1.5M

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