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Items: 20

1.
The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions
Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman
Mol Cell. Author manuscript; available in PMC 2024 Jun 15.
Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021
PMCID:
PMC10297700
AbstractArticlePDF–2.0M
2.
MitoStores: chaperone‐controlled protein granules store mitochondrial precursors in the cytosol
Lena Krämer, Niko Dalheimer, Markus Räschle, Zuzana Storchová, Jan Pielage, Felix Boos, Johannes M Herrmann
EMBO J. 2023 Apr; 42(7): e112309. Published online 2023 Jan 27. doi: 10.15252/embj.2022112309
PMCID:
PMC10068336
AbstractArticlePDF–3.9M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
The ubiquitin–proteasome system regulates meiotic chromosome organization
Xiao Yang, Meihui Song, Ying Wang, Taicong Tan, Zhongyu Tian, Binyuan Zhai, Xuan Yang, Yingjin Tan, Yanding Cao, Shaojun Dai, Shunxin Wang, Liangran Zhang
Proc Natl Acad Sci U S A. 2022 Apr 26; 119(17): e2106902119. Published online 2022 Apr 19. doi: 10.1073/pnas.2106902119
PMCID:
PMC9169913
AbstractArticlePDF–2.1M
5.
Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis
Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.
J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155
PMCID:
PMC8576917
AbstractArticlePDF–7.4M
6.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
7.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
8.
A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A
Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai
Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305
PMCID:
PMC6116949
AbstractArticlePDF–2.1M
9.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
10.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
11.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
12.
Genetic Networks Required to Coordinate Chromosome Replication by DNA Polymerases α, δ, and ε in Saccharomyces cerevisiae
Marion Dubarry, Conor Lawless, A. Peter Banks, Simon Cockell, David Lydall
G3 (Bethesda) 2015 Oct; 5(10): 2187–2197. Published online 2015 Aug 21. doi: 10.1534/g3.115.021493
PMCID:
PMC4593000
AbstractArticlePDF–1.8M
13.
Exploring the Yeast Acetylome Using Functional Genomics
Supipi Kaluarachchi Duffy, Helena Friesen, Anastasia Baryshnikova, Jean-Philippe Lambert, Yolanda T. Chong, Daniel Figeys, Brenda Andrews
Cell. Author manuscript; available in PMC 2014 Aug 30.
Published in final edited form as: Cell. 2012 May 11; 149(4): 936–948. doi: 10.1016/j.cell.2012.02.064
PMCID:
PMC4149804
AbstractArticlePDF–2.1M
14.
The Yeast SR-Like Protein Npl3 Links Chromatin Modification to mRNA Processing
Erica A. Moehle, Colm J. Ryan, Nevan J. Krogan, Tracy L. Kress, Christine Guthrie
PLoS Genet. 2012 Nov; 8(11): e1003101. Published online 2012 Nov 29. doi: 10.1371/journal.pgen.1003101
PMCID:
PMC3510044
AbstractArticlePDF–3.4M
15.
Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs
Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews
Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111
PMCID:
PMC3317160
AbstractArticlePDF–998K
16.
La-motif–dependent mRNA association with Slf1 promotes copper detoxification in yeast
Luca Schenk, Dominik M. Meinel, Katja Strässer, André P. Gerber
RNA. 2012 Mar; 18(3): 449–461. doi: 10.1261/rna.028506.111
PMCID:
PMC3285933
AbstractArticlePDF–812K
17.
A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria
Suzanne Hoppins, Sean R. Collins, Ann Cassidy-Stone, Eric Hummel, Rachel M. DeVay, Laura L. Lackner, Benedikt Westermann, Maya Schuldiner, Jonathan S. Weissman, Jodi Nunnari
J Cell Biol. 2011 Oct 17; 195(2): 323–340. doi: 10.1083/jcb.201107053
PMCID:
PMC3198156
AbstractArticlePDF–4.1M
18.
Purification of Nuclear Poly(A)-binding Protein Nab2 Reveals Association with the Yeast Transcriptome and a Messenger Ribonucleoprotein Core Structure
Julien Batisse, Claire Batisse, Aidan Budd, Bettina Böttcher, Ed Hurt
J Biol Chem. 2009 Dec 11; 284(50): 34911–34917. Published online 2009 Oct 19. doi: 10.1074/jbc.M109.062034
PMCID:
PMC2787353
AbstractArticlePDF–3.8M
19.
Proteomic Analysis of the Yeast Mitochondrial Outer Membrane Reveals Accumulation of a Subclass of Preproteins
Rene P. Zahedi, Albert Sickmann, Andreas M. Boehm, Christiane Winkler, Nicole Zufall, Birgit Schönfisch, Bernard Guiard, Nikolaus Pfanner, Chris Meisinger
Mol Biol Cell. 2006 Mar; 17(3): 1436–1450. doi: 10.1091/mbc.E05-08-0740
PMCID:
PMC1382330
AbstractArticlePDF–501K
20.
The proteome of Saccharomyces cerevisiae mitochondria
Albert Sickmann, Jörg Reinders, Yvonne Wagner, Cornelia Joppich, René Zahedi, Helmut E. Meyer, Birgit Schönfisch, Inge Perschil, Agnieszka Chacinska, Bernard Guiard, Peter Rehling, Nikolaus Pfanner, Chris Meisinger
Proc Natl Acad Sci U S A. 2003 Nov 11; 100(23): 13207–13212. Published online 2003 Oct 23. doi: 10.1073/pnas.2135385100
PMCID:
PMC263752
AbstractArticlePDF–694K

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