PMC Links for GEO Profiles (Select 35406492) - PMC

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Items: 20

Select item 78601201.

Zebrafish model for spondylo-megaepiphyseal-metaphyseal dysplasia reveals post-embryonic roles of Nkx3.2 in the skeleton

Joanna Smeeton, Natasha Natarajan, Arati Naveen Kumar, Tetsuto Miyashita, Pranidhi Baddam, Peter Fabian, Daniel Graf , J. Gage Crump

Development. 2021 Jan 15; 148(2): dev193409. Published online 2021 Jan 25. doi: 10.1242/dev.193409

PMCID:: PMC7860120

Article

Select item 72711942.

Single-cell transcriptomic analysis identifies the conversion of zebrafish Etv2-deficient vascular progenitors into skeletal muscle

Brendan Chestnut, Satish Casie Chetty, Andrew L. Koenig, Saulius Sumanas

Nat Commun. 2020; 11: 2796. Published online 2020 Jun 3. doi: 10.1038/s41467-020-16515-y

PMCID:: PMC7271194

Article PDF–15M

Select item 68033663.

Maintenance of spatial gene expression by Polycomb-mediated repression after formation of a vertebrate body plan

Julien Rougeot, Naomi D. Chrispijn, Marco Aben, Dei M. Elurbe, Karolina M. Andralojc, Patrick J. Murphy, Pascal W. T. C. Jansen, Michiel Vermeulen, Bradley R. Cairns, Leonie M. Kamminga

Development. 2019 Oct 1; 146(19): dev178590. Published online 2019 Sep 30. doi: 10.1242/dev.178590

PMCID:: PMC6803366

Article

Select item 59244354.

Expression of meis and hoxa11 in dipnoan and teleost fins provides new insights into the evolution of vertebrate appendages

Fernanda Langellotto, Maria Fiorentino, Elena De Felice, Luigi Caputi, Valeria Nittoli, Jean M. P. Joss, Paolo Sordino

EvoDevo. 2018; 9: 11. Published online 2018 Apr 27. doi: 10.1186/s13227-018-0099-9

PMCID:: PMC5924435

Article PDF–2.1M

Select item 59069205.

The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes

Martin Malmstrøm, Ralf Britz, Michael Matschiner, Ole K Tørresen, Renny Kurnia Hadiaty, Norsham Yaakob, Heok Hui Tan, Kjetill Sigurd Jakobsen, Walter Salzburger, Lukas Rüber

Genome Biol Evol. 2018 Apr; 10(4): 1088–1103. Published online 2018 Mar 15. doi: 10.1093/gbe/evy058

PMCID:: PMC5906920

Article PDF–949K

Select item 58053286.

Effects of fin fold mesenchyme ablation on fin development in zebrafish

Robert L. Lalonde, Marie-Andrée Akimenko

PLoS One. 2018; 13(2): e0192500. Published online 2018 Feb 8. doi: 10.1371/journal.pone.0192500

PMCID:: PMC5805328

Article PDF–30M

Select item 55580517.

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state

Yacine Kherdjemil, Robert L. Lalonde, Rushikesh Sheth, Annie Dumouchel, Gemma de Martino, Kyriel M. Pineault, Deneen M. Wellik, H. Scott Stadler, Marie-Andrée Akimenko, Marie Kmita

Nature. Author manuscript; available in PMC 2017 Nov 3.

Published in final edited form as: Nature. 2016 Nov 3; 539(7627): 89–92. Published online 2016 Oct 5. doi: 10.1038/nature19813

PMCID:: PMC5558051

Article PDF–1.0M

Select item 48524988.

Phenotypic chemical screening using a zebrafish neural crest EMT reporter identifies retinoic acid as an inhibitor of epithelial morphogenesis

Laura Jimenez, Jindong Wang, Monique A. Morrison, Clifford Whatcott, Katherine K. Soh, Steven Warner, David Bearss, Cicely A. Jette, Rodney A. Stewart

Dis Model Mech. 2016 Apr 1; 9(4): 389–400. doi: 10.1242/dmm.021790

PMCID:: PMC4852498

Article

Select item 46341379.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Article PDF–5.5M

Select item 379176910.

Evidence for at least six Hox clusters in the Japanese lamprey (Lethenteron japonicum)

Tarang K. Mehta, Vydianathan Ravi, Shinichi Yamasaki, Alison P. Lee, Michelle M. Lian, Boon-Hui Tay, Sumanty Tohari, Seiji Yanai, Alice Tay, Sydney Brenner, Byrappa Venkatesh

Proc Natl Acad Sci U S A. 2013 Oct 1; 110(40): 16044–16049. Published online 2013 Sep 16. doi: 10.1073/pnas.1315760110

PMCID:: PMC3791769

Article PDF–942K

Select item 369596711.

Notch Signalling Is Required for the Formation of Structurally Stable Muscle Fibres in Zebrafish

Susana Pascoal, Joana Esteves de Lima, Jonathan D. Leslie, Simon M. Hughes, Leonor Saúde

PLoS One. 2013; 8(6): e68021. Published online 2013 Jun 28. doi: 10.1371/journal.pone.0068021

PMCID:: PMC3695967

Article PDF–1.7M

Select item 350989712.

An Independent Genome Duplication Inferred from Hox Paralogs in the American Paddlefish—A Representative Basal Ray-Finned Fish and Important Comparative Reference

Karen D. Crow, Christopher D. Smith, Jan-Fang Cheng, Günter P. Wagner, Chris T. Amemiya

Genome Biol Evol. 2012; 4(9): 937–953. Published online 2012 Jul 31. doi: 10.1093/gbe/evs067

PMCID:: PMC3509897

Article PDF–1.3M

Select item 344866013.

Two Origins of Blastemal Progenitors Define Blastemal Regeneration of Zebrafish Lower Jaw

Xuelong Wang, Huihui He, Wenqiao Tang, Xin A. Zhang, Xianxin Hua, Jizhou Yan

PLoS One. 2012; 7(9): e45380. Published online 2012 Sep 21. doi: 10.1371/journal.pone.0045380

PMCID:: PMC3448660

Article PDF–4.1M

Select item 317805914.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Article PDF–1.0M

Select item 272018415.

Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates

Karin S. Kassahn, Vinh T. Dang, Simon J. Wilkins, Andrew C. Perkins, Mark A. Ragan

Genome Res. 2009 Aug; 19(8): 1404–1418. doi: 10.1101/gr.086827.108

PMCID:: PMC2720184

Article PDF–1010K

Select item 119954616.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305

PMCID:: PMC1199546

Article PDF–595K

Select item 31426817.

Bichir HoxA Cluster Sequence Reveals Surprising Trends in Ray-Finned Fish Genomic Evolution

Chi-hua Chiu, Ken Dewar, Günter P. Wagner, Kazuhiko Takahashi, Frank Ruddle, Christina Ledje, Peter Bartsch, Jean-Luc Scemama, Edmund Stellwag, Claudia Fried, Sonja J. Prohaska, Peter F. Stadler, Chris T. Amemiya

Genome Res. 2004 Jan; 14(1): 11–17. doi: 10.1101/gr.1712904