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Items: 1 to 20 of 32

1.
Highly expressed B3GALT5‐AS1 contributes to gastric cancer progression by recruiting WDR5 to mediate B3GALT5 and regulating β‐catenin/ZEB1 axis
Wei Feng, Yelan Tang, Rongrong Jing, Shaoqing Ju, Wei Zong
J Cell Mol Med. 2024 Sep; 28(17): e70061. Published online 2024 Sep 3. doi: 10.1111/jcmm.70061
PMCID:
PMC11369489
AbstractArticlePDF–40M
2.
B3galt5 deficiency attenuates hepatocellular carcinoma by suppressing mTOR/p70s6k-mediated glycolysis
Xiaoling Zhang, Hao Liu, Haidong Wang, Rongjie Zhao, Qian Lu, Yunlong Liu, Yicheng Han, LuluRen, Hongming Pan, Weidong Han
Cell Mol Life Sci. 2023 Jan; 80(1): 8. Published online 2022 Dec 10. doi: 10.1007/s00018-022-04601-x
PMCID:
PMC11072394
AbstractArticlePDF–2.7M
3.
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery
Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili
Nat Commun. 2022; 13: 4043. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31809-z
PMCID:
PMC9279285
AbstractArticlePDF–2.5M
4.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
5.
B3GALT5 knockout alters gycosphingolipid profile and facilitates transition to human naïve pluripotency
Ruey-Jen Lin, Ming-Wei Kuo, Bei-Chia Yang, Hsiu-Hui Tsai, Kowa Chen, Jing-Rong Huang, Yun-Shien Lee, Alice L. Yu, John Yu
Proc Natl Acad Sci U S A. 2020 Nov 3; 117(44): 27435–27444. Published online 2020 Oct 21. doi: 10.1073/pnas.2003155117
PMCID:
PMC7959494
AbstractArticlePDF–2.0M
6.
High B3GALT5 expression confers poor clinical outcome and contributes to tumor progression and metastasis in breast cancer
Yu-Mei Liao, Ya-Hui Wang, Jung-Tung Hung, Yu-Ju Lin, Yen-Lin Huang, Guo-Shiou Liao, Ya-Ling Hsu, Jen-Chien Wu, Alice L. Yu
Breast Cancer Res. 2021; 23: 5. Published online 2021 Jan 7. doi: 10.1186/s13058-020-01381-9
PMCID:
PMC7792347
AbstractArticlePDF–4.2M
7.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
8.
SSEA3 and Sialyl Lewis a Glycan Expression Is Controlled by B3GALT5 LTR through Lamin A-NFYA and SIRT1-STAT3 Signaling in Human ES Cells
Bi-He Cai, Hsueh-Yi Lee, Chi-Kan Chou, Po-Han Wu, Hsiang-Chi Huang, Chia-Chun Chao, Hsiao-Yu Chung, Reiji Kannagi
Cells. 2020 Jan; 9(1): 177. Published online 2020 Jan 10. doi: 10.3390/cells9010177
PMCID:
PMC7017369
AbstractArticlePDF–3.7M
9.
TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile
Karen Dendoncker, Steven Timmermans, Jolien Vandewalle, Melanie Eggermont, Joanna Lempiäinen, Evelien Van Hamme, Sylviane Dewaele, Sofie Vandevyver, Marlies Ballegeer, Jolien Souffriau, Lise Van Wyngene, Kelly Van Looveren, Tineke Vanderhaeghen, Rudi Beyaert, Karolien De Bosscher, Jorma J. Palvimo, Marc Van Montagu, Claude Libert
Proc Natl Acad Sci U S A. 2019 Jun 25; 116(26): 12942–12951. Published online 2019 Jun 10. doi: 10.1073/pnas.1821565116
Correction in:
Proc Natl Acad Sci U S A. 2019 Jul 30; 116(31): 15745.
PMCID:
PMC6600915
AbstractArticlePDF–1.7M
10.
Signaling pathway of globo-series glycosphingolipids and β1,3-galactosyltransferase V (β3GalT5) in breast cancer
Po-Kai Chuang, Michael Hsiao, Tsui-Ling Hsu, Chuan-Fa Chang, Chung-Yi Wu, Bo-Rui Chen, Han-Wen Huang, Kuo-Shiang Liao, Chen-Chun Chen, Chi-Long Chen, Shun-Min Yang, Chiung Wen Kuo, Peilin Chen, Ping-Tzu Chiu, I-Ju Chen, Jiann-Shiun Lai, Cheng-Der Tony Yu, Chi-Huey Wong
Proc Natl Acad Sci U S A. 2019 Feb 26; 116(9): 3518–3523. Published online 2019 Feb 11. doi: 10.1073/pnas.1816946116
PMCID:
PMC6397564
AbstractArticlePDF–1.2M
11.
High-throughput analysis of the RNA-induced silencing complex in myotonic dystrophy type 1 patients identifies the dysregulation of miR-29c and its target ASB2
Marisa Cappella, Alessandra Perfetti, Beatrice Cardinali, Jose Manuel Garcia-Manteiga, Matteo Carrara, Claudia Provenzano, Paola Fuschi, Rosanna Cardani, Laura Valentina Renna, Giovanni Meola, Germana Falcone, Fabio Martelli
Cell Death Dis. 2018 Jul; 9(7): 729. Published online 2018 Jun 28. doi: 10.1038/s41419-018-0769-5
PMCID:
PMC6023919
AbstractArticlePDF–1.2M
12.
High expression FUT1 and B3GALT5 is an independent predictor of postoperative recurrence and survival in hepatocellular carcinoma
Huan-Hsien Kuo, Ruey-Jen Lin, Jung-Tung Hung, Chung-Bao Hsieh, Tsai-Hsien Hung, Fei-Yun Lo, Ming-Yi Ho, Chau-Ting Yeh, Yen-Lin Huang, John Yu, Alice L. Yu
Sci Rep. 2017; 7: 10750. Published online 2017 Sep 7. doi: 10.1038/s41598-017-11136-w
PMCID:
PMC5589766
AbstractArticlePDF–7.8M
13.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
14.
Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing
Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown
Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114
PMCID:
PMC5495225
AbstractArticlePDF–1.3M
15.
Trisomy 21 Alters DNA Methylation in Parent-of-Origin-Dependent and -Independent Manners
Antônio Francisco Alves da Silva, Filipe Brum Machado, Érika Cristina Pavarino, Joice Matos Biselli-Périco, Bruna Lancia Zampieri, Ronaldo da Silva Francisco Junior, Pedro Thyago Mozer Rodrigues, Douglas Terra Machado, Cíntia Barros Santos-Rebouças, Maria Gomes Fernandes, Susana Marina Chuva de Sousa Lopes, Álvaro Fabricio Lopes Rios, Enrique Medina-Acosta
PLoS One. 2016; 11(4): e0154108. Published online 2016 Apr 21. doi: 10.1371/journal.pone.0154108
PMCID:
PMC4839675
AbstractArticlePDF–3.5M
16.
Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9
Jeannette Simino, Yun Ju Sung, Rezart Kume, Karen Schwander, D. C. Rao
Front Genet. 2013; 4: 277. Published online 2013 Dec 12. doi: 10.3389/fgene.2013.00277
PMCID:
PMC3860258
AbstractArticlePDF–2.9M
17.
Genome-Wide Association Study of Suicide Attempts in Mood Disorder Patients
Roy H. Perlis, Jie Huang, Shaun Purcell, Maurizio Fava, A. John Rush, Patrick F. Sullivan, Steven P. Hamilton, Francis J. McMahon, Thomas Schulze, James B. Potash, Peter P. Zandi, Virginia L. Willour, Brenda W. Penninx, Dorret I. Boomsma, Nicole Vogelzangs, Christel M. Middeldorp, Marcella Rietschel, Markus Nöthen, Sven Cichon, Hugh Gurling, Nick Bass, Andrew McQuillin, Marian Hamshere, Wellcome Trust Case Control Consortium Bipolar Disorder Group, Nick Craddock, Pamela Sklar, Jordan W. Smoller
Am J Psychiatry. Author manuscript; available in PMC 2013 Oct 11.
Published in final edited form as: Am J Psychiatry. 2010 Dec; 167(12): 1499–1507. Published online 2010 Nov 1. doi: 10.1176/appi.ajp.2010.10040541
Correction in:
volume 168 on page 100
PMCID:
PMC3795390
AbstractArticlePDF–65K
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
Genome-Wide Association Study of Coronary Heart Disease and Its Risk Factors in 8,090 African Americans: The NHLBI CARe Project
Guillaume Lettre, Cameron D. Palmer, Taylor Young, Kenechi G. Ejebe, Hooman Allayee, Emelia J. Benjamin, Franklyn Bennett, Donald W. Bowden, Aravinda Chakravarti, Al Dreisbach, Deborah N. Farlow, Aaron R. Folsom, Myriam Fornage, Terrence Forrester, Ervin Fox, Christopher A. Haiman, Jaana Hartiala, Tamara B. Harris, Stanley L. Hazen, Susan R. Heckbert, Brian E. Henderson, Joel N. Hirschhorn, Brendan J. Keating, Stephen B. Kritchevsky, Emma Larkin, Mingyao Li, Megan E. Rudock, Colin A. McKenzie, James B. Meigs, Yang A. Meng, Tom H. Mosley, Jr., Anne B. Newman, Christopher H. Newton-Cheh, Dina N. Paltoo, George J. Papanicolaou, Nick Patterson, Wendy S. Post, Bruce M. Psaty, Atif N. Qasim, Liming Qu, Daniel J. Rader, Susan Redline, Muredach P. Reilly, Alexander P. Reiner, Stephen S. Rich, Jerome I. Rotter, Yongmei Liu, Peter Shrader, David S. Siscovick, W. H. Wilson Tang, Herman A. Taylor, Jr., Russell P. Tracy, Ramachandran S. Vasan, Kevin M. Waters, Rainford Wilks, James G. Wilson, Richard R. Fabsitz, Stacey B. Gabriel, Sekar Kathiresan, Eric Boerwinkle
PLoS Genet. 2011 Feb; 7(2): e1001300. Published online 2011 Feb 10. doi: 10.1371/journal.pgen.1001300
PMCID:
PMC3037413
AbstractArticlePDF–423K
20.
Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters
Hans-Jörg Warnatz, Robert Querfurth, Anna Guerasimova, Xi Cheng, Stefan A. Haas, Andrew L. Hufton, Thomas Manke, Dominique Vanhecke, Wilfried Nietfeld, Martin Vingron, Michal Janitz, Hans Lehrach, Marie-Laure Yaspo
Nucleic Acids Res. 2010 Oct; 38(18): 6112–6123. Published online 2010 May 21. doi: 10.1093/nar/gkq402
PMCID:
PMC2952857
AbstractArticlePDF–4.0M

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