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Select item 69934611.

Investigation of the Mechanism of the Cell Wall DD-Carboxypeptidase Reaction of Penicillin-Binding Protein 5 of Escherichia coli by Quantum Mechanics/Molecular Mechanics Calculations

Qicun Shi, Samy O. Meroueh, Jed F. Fisher, Shahriar Mobashery

J Am Chem Soc. Author manuscript; available in PMC 2020 Jan 31.

Published in final edited form as: J Am Chem Soc. 2008 Jul 23; 130(29): 9293–9303. Published online 2008 Jun 25. doi: 10.1021/ja801727k

PMCID:: PMC6993461

Abstract Article PDF–2.3M

Select item 64787132.

Structural insight into YcbB-mediated beta-lactam resistance in Escherichia coli

Nathanael A. Caveney, Guillermo Caballero, Henri Voedts, Ana Niciforovic, Liam J. Worrall, Marija Vuckovic, Matthieu Fonvielle, Jean-Emmanuel Hugonnet, Michel Arthur, Natalie C. J. Strynadka

Nat Commun. 2019; 10: 1849. Published online 2019 Apr 23. doi: 10.1038/s41467-019-09507-0

PMCID:: PMC6478713

Abstract Article PDF–5.3M

Select item 55963423.

Nils Y. Meiresonne, René van der Ploeg, Mark A. Hink, Tanneke den Blaauwen

mBio. 2017 Sep-Oct; 8(5): e01089-17. Published online 2017 Sep 12. doi: 10.1128/mBio.01089-17

Correction in:: mBio. 2022 Jan-Feb; 13(1): e03577-21.

PMCID:: PMC5596342

Abstract Article PDF–3.9M

Select item 36465214.

Loss ofO-antigen increases cell shape abnormalities in penicillin-binding protein mutants of Escherichia coli

Anindya S. Ghosh, Amy L. Melquist, Kevin D. Young

FEMS Microbiol Lett. Author manuscript; available in PMC 2013 May 7.

Published in final edited form as: FEMS Microbiol Lett. 2006 Oct; 263(2): 252–257. doi: 10.1111/j.1574-6968.2006.00429.x

PMCID:: PMC3646521

Abstract Article PDF–374K

Select item 30975175.

Common β-lactamases inhibit bacterial biofilm formation

Claude V. Gallant, Craig Daniels, Jacqueline M. Leung, Anindya S. Ghosh, Kevin D. Young, Lakshmi P. Kotra, Lori L. Burrows

Mol Microbiol. Author manuscript; available in PMC 2011 May 19.

Published in final edited form as: Mol Microbiol. 2005 Nov; 58(4): 1012–1024. doi: 10.1111/j.1365-2958.2005.04892.x

PMCID:: PMC3097517

Abstract Article PDF–1.9M

Select item 29093926.

Septal and lateral wall localization of PBP5, the major D,D-carboxypeptidase of Escherichia coli, requires substrate recognition and membrane attachment

Lakshmiprasad Potluri, Aneta Karczmarek, Jolanda Verheul, Andre Piette, Jean-Marc Wilkin, Nadine Werth, Manuel Banzhaf, Waldemar Vollmer, Kevin D Young, Martine Nguyen-Distèche, Tanneke den Blaauwen

Mol Microbiol. 2010 Jul; 77(2): 300–323. Published online 2010 Jun 7. doi: 10.1111/j.1365-2958.2010.07205.x

PMCID:: PMC2909392

Abstract Article PDF–1.4M

Select item 25257977.

Crystal Structures of Complexes of Bacterial DD-Peptidases with Peptidoglycan-mimetic Ligands: The Substrate Specificity Puzzle

Eric Sauvage, Ailsa J. Powell, Jason Heilemann, Helen R. Josephine, Paulette Charlier, Christopher Davies, R.F. Pratt

J Mol Biol. Author manuscript; available in PMC 2009 Aug 29.

Published in final edited form as: J Mol Biol. 2008 Aug 29; 381(2): 383–393. Published online 2008 Jun 10. doi: 10.1016/j.jmb.2008.06.012

PMCID:: PMC2525797

Abstract Article PDF–1.3M

Select item 23740218.

Interaction energies between β-lactam antibiotics and E. coli penicillin-binding protein 5 by reversible thermal denaturation

Beth M. Beadle, Robert A. Nicholas, Brian K. Shoichet

Protein Sci. 2001 Jun; 10(6): 1254–1259. doi: 10.1110/ps.52001

PMCID:: PMC2374021

Abstract Article PDF–286K

Select item 19518509.

Role of Peptidoglycan Amidases in the Development and Morphology of the Division Septum in Escherichia coli

Richa Priyadarshini, Miguel A. de Pedro, Kevin D. Young

J Bacteriol. 2007 Jul; 189(14): 5334–5347. Published online 2007 May 4. doi: 10.1128/JB.00415-07

PMCID:: PMC1951850

Abstract Article PDF–433K

Select item 195183210.

FtsZ Directs a Second Mode of Peptidoglycan Synthesis in Escherichia coli

Archana Varma, Miguel A. de Pedro, Kevin D. Young

J Bacteriol. 2007 Aug; 189(15): 5692–5704. Published online 2007 May 18. doi: 10.1128/JB.00455-07

PMCID:: PMC1951832

Abstract Article PDF–474K

Select item 193254911.

Cytoplasmic-Membrane Anchoring of a Class A β-Lactamase and Its Capacity in Manifesting Antibiotic Resistance

Maxim Suvorov, Sergei B. Vakulenko, Shahriar Mobashery

Antimicrob Agents Chemother. 2007 Aug; 51(8): 2937–2942. Published online 2007 May 14. doi: 10.1128/AAC.00011-07

PMCID:: PMC1932549

Abstract Article PDF–127K

Select item 168148112.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 154003813.

Daughter Cell Separation by Penicillin-Binding Proteins and Peptidoglycan Amidases in Escherichia coli

Richa Priyadarshini, David L. Popham, Kevin D. Young

J Bacteriol. 2006 Aug; 188(15): 5345–5355. doi: 10.1128/JB.00476-06

PMCID:: PMC1540038

Abstract Article PDF–520K

Select item 145705214.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 134745215.

MEROPS: the peptidase database

Neil D. Rawlings, Fraser R. Morton, Alan J. Barrett

Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D270–D272. Published online 2005 Dec 28. doi: 10.1093/nar/gkj089

PMCID:: PMC1347452

Abstract Article PDF–55K

Select item 132520016.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405