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Items: 16

1.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
2.
RNA-based regulation of genes of tryptophan synthesis and degradation, in bacteria
Charles Yanofsky
RNA. 2007 Aug; 13(8): 1141–1154. doi: 10.1261/rna.620507
PMCID:
PMC1924887
AbstractArticlePDF–1.5M
3.
Experimental and Computational Assessment of Conditionally Essential Genes in Escherichia coli
Andrew R. Joyce, Jennifer L. Reed, Aprilfawn White, Robert Edwards, Andrei Osterman, Tomoya Baba, Hirotada Mori, Scott A. Lesely, Bernhard Ø. Palsson, Sanjay Agarwalla
J Bacteriol. 2006 Dec; 188(23): 8259–8271. Published online 2006 Sep 29. doi: 10.1128/JB.00740-06
PMCID:
PMC1698209
AbstractArticlePDF–779K
4.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
5.
Generating Tetracycline-Inducible Auxotrophy in Escherichia coli and Salmonella enterica Serovar Typhimurium by Using an Insertion Element and a Hyperactive Transposase
Martin Köstner, Britta Schmidt, Ralph Bertram, Wolfgang Hillen
Appl Environ Microbiol. 2006 Jul; 72(7): 4717–4725. doi: 10.1128/AEM.00492-06
PMCID:
PMC1489314
AbstractArticlePDF–329K
6.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
7.
Gene targeting using randomly inserted group II introns (targetrons) recovered from an Escherichia coli gene disruption library
Jun Yao, Jin Zhong, Alan M. Lambowitz
Nucleic Acids Res. 2005; 33(10): 3351–3362. Published online 2005 Jun 9. doi: 10.1093/nar/gki649
PMCID:
PMC1148171
AbstractArticlePDF–790K
8.
Attenuation in the Escherichia coli tryptophan operon: role of RNA secondary structure involving the tryptophan codon region.
D L Oxender, G Zurawski, C Yanofsky
Proc Natl Acad Sci U S A. 1979 Nov; 76(11): 5524–5528. doi: 10.1073/pnas.76.11.5524
PMCID:
PMC411681
SummaryPage BrowsePDF–1.3M
9.
The complete nucleotide sequence of the tryptophan operon of Escherichia coli.
C Yanofsky, T Platt, I P Crawford, B P Nichols, G E Christie, H Horowitz, M VanCleemput, A M Wu
Nucleic Acids Res. 1981 Dec 21; 9(24): 6647–6668. doi: 10.1093/nar/9.24.6647
PMCID:
PMC327632
SummaryPage BrowsePDF–1.7M
10.
Mechanism of 3-Methylanthranilic Acid Derepression of the Tryptophan Operon in Escherichia coli
William A. Held, Oliver H. Smith
J Bacteriol. 1970 Jan; 101(1): 209–217. doi: 10.1128/jb.101.1.209-217.1970
PMCID:
PMC250472
SummaryPage BrowsePDF–1.3M
11.
Anthranilate Synthetase, an Enzyme Specified by the Tryptophan Operon of Escherichia coli: Comparative Studies on the Complex and the Subunits
Junetsu Ito, Charles Yanofsky
J Bacteriol. 1969 Feb; 97(2): 734–742. doi: 10.1128/jb.97.2.734-742.1969
PMCID:
PMC249753
SummaryPage BrowsePDF–1.1M
12.
Anthranilate Synthetase, an Enzyme Specified by the Tryptophan Operon of Escherichia coli: Purification and Characterization of Component I
Junetsu Ito, Edward C. Cox, Charles Yanofsky
J Bacteriol. 1969 Feb; 97(2): 725–733. doi: 10.1128/jb.97.2.725-733.1969
PMCID:
PMC249752
SummaryPage BrowsePDF–1.4M
13.
Regulation of Tyrosine Biosynthesis in Escherichia coli K-12: Isolation and Characterization of Operator Mutants
Ina E. Mattern, J. Pittard
J Bacteriol. 1971 Jul; 107(1): 8–15. doi: 10.1128/jb.107.1.8-15.1971
PMCID:
PMC246880
SummaryPage BrowsePDF–1.0M
14.
Role of regulatory features of the trp operon of Escherichia coli in mediating a response to a nutritional shift.
C Yanofsky, V Horn
J Bacteriol. 1994 Oct; 176(20): 6245–6254. doi: 10.1128/jb.176.20.6245-6254.1994
PMCID:
PMC196965
SummaryPage BrowsePDF–2.2M
15.
Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison
Lee Ann McCue, William Thompson, C. Steven Carmack, Charles E. Lawrence
Genome Res. 2002 Oct; 12(10): 1523–1532. doi: 10.1101/gr.323602
PMCID:
PMC187528
AbstractArticlePDF–192K
16.
Characterization of composite aminodeoxyisochorismate synthase and aminodeoxyisochorismate lyase activities of anthranilate synthase.
A A Morollo, R Bauerle
Proc Natl Acad Sci U S A. 1993 Nov 1; 90(21): 9983–9987. doi: 10.1073/pnas.90.21.9983
PMCID:
PMC47697
SummaryPage BrowsePDF–1.1M

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