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Items: 1 to 20 of 43

1.
The rarA gene as part of an expanded RecFOR recombination pathway: Negative epistasis and synthetic lethality with ruvB, recG, and recQ
Kanika Jain, Elizabeth A. Wood, Michael M. Cox
PLoS Genet. 2021 Dec; 17(12): e1009972. Published online 2021 Dec 22. doi: 10.1371/journal.pgen.1009972
PMCID:
PMC8735627
AbstractArticlePDF–3.5M
2.
Regression of Replication Forks Stalled by Leading-strand Template Damage: I. BOTH RecG AND RuvAB CATALYZE REGRESSION, BUT RuvC CLEAVES THE HOLLIDAY JUNCTIONS FORMED BY RecG PREFERENTIALLY
Sankalp Gupta, Joseph T. P. Yeeles, Kenneth J. Marians
J Biol Chem. 2014 Oct 10; 289(41): 28376–28387. Published online 2014 Aug 19. doi: 10.1074/jbc.M114.587881
PMCID:
PMC4192490
AbstractArticlePDF–2.9M
3.
Modulation of DNA damage tolerance in Escherichia coli recG and ruv strains by mutations affecting PriB, the ribosome and RNA polymerase
Akeel A Mahdi, Geoffrey S Briggs, Robert G Lloyd
Mol Microbiol. 2012 Nov; 86(3): 675–691. Published online 2012 Sep 7. doi: 10.1111/mmi.12010
PMCID:
PMC3533792
AbstractArticlePDF–1.5M
4.
Replication Forks Stalled at Ultraviolet Lesions Are Rescued via RecA and RuvABC Protein-catalyzed Disintegration in Escherichia coli
Sharik R. Khan, Andrei Kuzminov
J Biol Chem. 2012 Feb 24; 287(9): 6250–6265. Published online 2011 Dec 21. doi: 10.1074/jbc.M111.322990
PMCID:
PMC3307332
AbstractArticlePDF–4.6M
5.
A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair
Mohan Babu, Natalia Beloglazova, Robert Flick, Chris Graham, Tatiana Skarina, Boguslaw Nocek, Alla Gagarinova, Oxana Pogoutse, Greg Brown, Andrew Binkowski, Sadhna Phanse, Andrzej Joachimiak, Eugene V. Koonin, Alexei Savchenko, Andrew Emili, Jack Greenblatt, Aled M. Edwards, Alexander F. Yakunin
Mol Microbiol. Author manuscript; available in PMC 2012 Jan 1.
Published in final edited form as: Mol Microbiol. 2011 Jan; 79(2): 484–502. Published online 2010 Dec 7. doi: 10.1111/j.1365-2958.2010.07465.x
PMCID:
PMC3071548
AbstractArticlePDF–2.6M
6.
RecQ Promotes Toxic Recombination in Cells Lacking Recombination-Intermediate-Removal Proteins
Daniel B. Magner, Matthew D. Blankschien, Jennifer A. Lee, Jeanine M. Pennington, James R. Lupski, Susan M. Rosenberg
Mol Cell. Author manuscript; available in PMC 2010 Jun 7.
Published in final edited form as: Mol Cell. 2007 Apr 27; 26(2): 273–286. doi: 10.1016/j.molcel.2007.03.012
PMCID:
PMC2881834
AbstractArticlePDF–2.5M
7.
RecA4142 Causes SOS Constitutive Expression by Loading onto Reversed Replication Forks in Escherichia coli K-12
Jarukit Edward Long, Shawn C. Massoni, Steven J. Sandler
J Bacteriol. 2010 May; 192(10): 2575–2582. Published online 2010 Mar 19. doi: 10.1128/JB.01623-09
PMCID:
PMC2863556
AbstractArticlePDF–1.1M
8.
Proteolysis in the SOS response and metal homeostasis in Escherichia coli
Mihaela Pruteanu, Tania A. Baker
Res Microbiol. Author manuscript; available in PMC 2010 Nov 1.
Published in final edited form as: Res Microbiol. 2009 Nov; 160(9): 677–683. Published online 2009 Sep 10. doi: 10.1016/j.resmic.2009.08.012
PMCID:
PMC2783568
AbstractArticlePDF–341K
9.
Resolution of Joint Molecules by RuvABC and RecG Following Cleavage of the Escherichia coli Chromosome by EcoKI
Laura Wardrope, Ewa Okely, David Leach
PLoS One. 2009; 4(8): e6542. Published online 2009 Aug 6. doi: 10.1371/journal.pone.0006542
PMCID:
PMC2716532
AbstractArticlePDF–758K
10.
Efficient Second Strand Cleavage during Holliday Junction Resolution by RuvC Requires Both Increased Junction Flexibility and an Exposed 5′ Phosphate
Fekret Osman, Louise Gaskell, Matthew C. Whitby
PLoS One. 2009; 4(4): e5347. Published online 2009 Apr 28. doi: 10.1371/journal.pone.0005347
PMCID:
PMC2670506
AbstractArticlePDF–864K
11.
Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks
John P. Rooney, Ajish D. George, Ashish Patil, Ulrike Begley, Erin Bessette, Maria R. Zappala, Xin Huang, Douglas A. Conklin, Richard P. Cunningham, Thomas J. Begley
Genomics. Author manuscript; available in PMC 2010 Jan 1.
Published in final edited form as: Genomics. 2009 Jan; 93(1): 42–51. Published online 2008 Oct 16. doi: 10.1016/j.ygeno.2008.09.001
PMCID:
PMC2633870
AbstractArticlePDF–1.9M
12.
ruvA and ruvB mutants specifically impaired for replication fork reversal
Marie Le Masson, Zeynep Baharoglu, Bénédicte Michel
Mol Microbiol. 2008 Oct; 70(2): 537–548. Published online 2008 Sep 15. doi: 10.1111/j.1365-2958.2008.06431.x
PMCID:
PMC2628435
AbstractArticlePDF–752K
13.
Synthetic Lethality with the dut Defect in Escherichia coli Reveals Layers of DNA Damage of Increasing Complexity Due to Uracil Incorporation
Helen Ting, Elena A. Kouzminova, Andrei Kuzminov
J Bacteriol. 2008 Sep; 190(17): 5841–5854. Published online 2008 Jun 27. doi: 10.1128/JB.00711-08
PMCID:
PMC2519533
AbstractArticlePDF–1.1M
14.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
15.
Defective Ribonucleoside Diphosphate Reductase Impairs Replication Fork Progression in Escherichia coli
Estrella Guarino, Alfonso Jiménez-Sánchez, Elena C. Guzmán
J Bacteriol. 2007 May; 189(9): 3496–3501. Published online 2007 Feb 23. doi: 10.1128/JB.01632-06
PMCID:
PMC1855873
AbstractArticlePDF–140K
16.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
17.
Direct observation of DNA rotation during branch migration of Holliday junction DNA by Escherichia coli RuvA–RuvB protein complex
Yong-Woon Han, Tomomi Tani, Masahito Hayashi, Takashi Hishida, Hiroshi Iwasaki, Hideo Shinagawa, Yoshie Harada
Proc Natl Acad Sci U S A. 2006 Aug 1; 103(31): 11544–11548. Published online 2006 Jul 24. doi: 10.1073/pnas.0600753103
PMCID:
PMC1544206
AbstractArticlePDF–1.3M
18.
RuvAB and RecG are not essential for the recovery of DNA synthesis following UV-induced DNA damage in Escherichia coli.
Janet R Donaldson, Charmain T Courcelle, Justin Courcelle
Genetics. 2004 Apr; 166(4): 1631–1640. doi: 10.1534/genetics.166.4.1631
PMCID:
PMC1470822
SummaryPDF–201K
19.
RuvAB is essential for replication forks reversal in certain replication mutants
Zeynep Baharoglu, Mirjana Petranovic, Maria-Jose Flores, Bénédicte Michel
EMBO J. 2006 Feb 8; 25(3): 596–604. Published online 2006 Jan 19. doi: 10.1038/sj.emboj.7600941
PMCID:
PMC1383526
AbstractArticlePDF–270K
20.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K

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