U.S. flag

An official website of the United States government

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Links from GEO Profiles

Items: 1 to 20 of 74

1.
Recipient UvrD helicase is involved in single- to double-stranded DNA conversion during conjugative plasmid transfer
Minjia Shen, Kelly Goldlust, Sandra Daniel, Christian Lesterlin, Yoshiharu Yamaichi
Nucleic Acids Res. 2023 Apr 11; 51(6): 2790–2799. Published online 2023 Feb 11. doi: 10.1093/nar/gkad075
PMCID:
PMC10085688
ArticlePDF–3.6M
2.
MutL sliding clamps coordinate exonuclease-independent Escherichia coli mismatch repair
Jiaquan Liu, Ryanggeun Lee, Brooke M. Britton, James A. London, Keunsang Yang, Jeungphill Hanne, Jong-Bong Lee, Richard Fishel
Nat Commun. 2019; 10: 5294. Published online 2019 Nov 22. doi: 10.1038/s41467-019-13191-5
PMCID:
PMC6876574
ArticlePDF–1.5M
3.
UvrD helicase activation by MutL involves rotation of its 2B subdomain
Yerdos A. Ordabayev, Binh Nguyen, Alexander G. Kozlov, Haifeng Jia, Timothy M. Lohman
Proc Natl Acad Sci U S A. 2019 Aug 13; 116(33): 16320–16325. Published online 2019 Jul 30. doi: 10.1073/pnas.1905513116
PMCID:
PMC6697780
ArticlePDF–1.1M
4.
Direct removal of RNA polymerase barriers to replication by accessory replicative helicases
Michelle Hawkins, Juachi U Dimude, Jamieson A L Howard, Abigail J Smith, Mark S Dillingham, Nigel J Savery, Christian J Rudolph, Peter McGlynn
Nucleic Acids Res. 2019 Jun 4; 47(10): 5100–5113. Published online 2019 Mar 14. doi: 10.1093/nar/gkz170
PMCID:
PMC6547429
ArticlePDF–3.0M
5.
Free-energy simulations reveal molecular mechanism for functional switch of a DNA helicase
Wen Ma, Kevin D Whitley, Yann R Chemla, Zaida Luthey-Schulten, Klaus Schulten
eLife. 2018; 7: e34186. Published online 2018 Apr 17. doi: 10.7554/eLife.34186
PMCID:
PMC5973834
ArticlePDF–4.9M
6.
Large domain movements upon UvrD dimerization and helicase activation
Binh Nguyen, Yerdos Ordabayev, Joshua E. Sokoloski, Elizabeth Weiland, Timothy M. Lohman
Proc Natl Acad Sci U S A. 2017 Nov 14; 114(46): 12178–12183. Published online 2017 Oct 30. doi: 10.1073/pnas.1712882114
PMCID:
PMC5699075
ArticlePDF–1.5M
7.
Modulation of Escherichia coli UvrD Single-Stranded DNA Translocation by DNA Base Composition
Eric J. Tomko, Timothy M. Lohman
Biophys J. 2017 Oct 3; 113(7): 1405–1415. Published online 2017 Oct 3. doi: 10.1016/j.bpj.2017.08.023
PMCID:
PMC5627390
ArticlePDF–1.1M
8.
UvrD facilitates DNA repair by pulling RNA polymerase backwards
Vitaly Epshtein, Venu Kamarthapu, Katelyn McGary, Vladimir Svetlov, Beatrix Ueberheide, Sergey Proshkin, Alexander Mironov, Evgeny Nudler
Nature. Author manuscript; available in PMC 2015 Jun 18.
Published in final edited form as: Nature. 2014 Jan 16; 505(7483): 372–377. Published online 2014 Jan 8. doi: 10.1038/nature12928
PMCID:
PMC4471481
ArticlePDF–1.8M
9.
Direct observation of structure-function relationship in a nucleic acid processing enzyme
Matthew J. Comstock, Kevin D. Whitley, Haifeng Jia, Joshua Sokoloski, Timothy M. Lohman, Taekjip Ha, Yann R. Chemla
Science. Author manuscript; available in PMC 2015 Oct 17.
Published in final edited form as: Science. 2015 Apr 17; 348(6232): 352–354. Published online 2015 Apr 16. doi: 10.1126/science.aaa0130
PMCID:
PMC4424897
ArticlePDF–333K
10.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
ArticlePDF–1.1M
11.
The UvrD303 Hyper-helicase Exhibits Increased Processivity
Matthew J. Meiners, Kambiz Tahmaseb, Steven W. Matson
J Biol Chem. 2014 Jun 13; 289(24): 17100–17110. Published online 2014 May 5. doi: 10.1074/jbc.M114.565309
PMCID:
PMC4059151
ArticlePDF–1.5M
12.
Specificity in suppression of SOS expression by recA4162 and uvrD303
Shawn C. Massoni, Steven J. Sandler
DNA Repair (Amst) Author manuscript; available in PMC 2014 Dec 1.
Published in final edited form as: DNA Repair (Amst). 2013 Dec; 12(12): 10.1016/j.dnarep.2013.09.003. Published online 2013 Sep 29. doi: 10.1016/j.dnarep.2013.09.003
PMCID:
PMC3845027
ArticlePDF–2.1M
13.
Mismatch Repair Inhibits Homeologous Recombination by Coordinated Directional Unwinding of Trapped DNA Structures
Khek-Chian Tham, Nicolaas Hermans, Herrie H.K. Winterwerp, Michael M. Cox, Claire Wyman, Roland Kanaar, Joyce H.G. Lebbink
Mol Cell. Author manuscript; available in PMC 2014 Aug 8.
Published in final edited form as: Mol Cell. 2013 Aug 8; 51(3): 326–337. doi: 10.1016/j.molcel.2013.07.008
PMCID:
PMC3781583
ArticlePDF–1.4M
14.
Direct imaging of single UvrD helicase dynamics on long single-stranded DNA
Kyung Suk Lee, Hamza Balci, Haifeng Jia, Timothy M. Lohman, Taekjip Ha
Nat Commun. 2013 May 21; 4: 1878. Published online 2013 May 21. doi: 10.1038/ncomms2882
PMCID:
PMC3674262
ArticlePDF–2.0M
15.
Identification of two DNA helicases UvrD and DinG as suppressors for lethality caused by mutant cspA mRNAs
Jihwan Hwang, Kangseok Lee, Sangita Phadtare, Masayori Inouye
J Mol Microbiol Biotechnol. Author manuscript; available in PMC 2013 Jul 24.
Published in final edited form as: J Mol Microbiol Biotechnol. 2012; 22(3): 135–146. Published online 2012 Jul 24. doi: 10.1159/000339832
PMCID:
PMC3480728
ArticlePDF–2.2M
16.
Single stranded DNA translocation of E. coli UvrD monomer is tightly coupled to ATP hydrolysis
Eric J. Tomko, Christopher J. Fischer, Timothy M. Lohman
J Mol Biol. Author manuscript; available in PMC 2013 Apr 20.
Published in final edited form as: J Mol Biol. 2012 Apr 20; 418(1-2): 32–46. Published online 2012 Feb 14. doi: 10.1016/j.jmb.2012.02.013
PMCID:
PMC3311787
ArticlePDF–3.1M
17.
Pathways of Resistance to Thymineless Death in Escherichia coli and the Function of UvrD
Natalie C. Fonville, Zalman Vaksman, Jessica DeNapoli, P. J. Hastings, Susan M. Rosenberg
Genetics. 2011 Sep; 189(1): 23–36. doi: 10.1534/genetics.111.130161
PMCID:
PMC3176125
ArticlePDF–1.8M
18.
Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding
Haifeng Jia, Sergey Korolev, Anita Niedziela-Majka, Nasib K. Maluf, George H. Gauss, Sua Myong, Taekjip Ha, Gabriel Waksman, Timothy M. Lohman
J Mol Biol. Author manuscript; available in PMC 2012 Aug 19.
Published in final edited form as: J Mol Biol. 2011 Aug 19; 411(3): 633–648. Published online 2011 Jun 17. doi: 10.1016/j.jmb.2011.06.019
Correction in:
volume 418 on page 264
PMCID:
PMC3146578
ArticlePDF–2.8M
19.
The unstructured C-terminal extension of UvrD interacts with UvrB, but is dispensable for nucleotide excision repair
Laura Manelyte, Colin P. Guy, Rachel M. Smith, Mark S. Dillingham, Peter McGlynn, Nigel J. Savery
DNA Repair (Amst) 2009 Nov 2; 8(11): 1300–1310. doi: 10.1016/j.dnarep.2009.08.005
PMCID:
PMC2997466
Article
20.
5′-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase
Eric J Tomko, Haifeng Jia, Jeehae Park, Nasib K Maluf, Taekjip Ha, Timothy M Lohman
EMBO J. 2010 Nov 17; 29(22): 3826–3839. Published online 2010 Sep 28. doi: 10.1038/emboj.2010.242
PMCID:
PMC2989100
ArticlePDF–2.4M

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Filter your results:

Find related data

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Literature > PubMed Central (PMC)
Support Center