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Select item 82213901.

Detection of key sites of dimer dissociation and unfolding initiation during activation of acid-stress chaperone HdeA at low pH

Marlyn A. Widjaja, Jafaeth S. Gomez, Jonathon M. Benson, Karin A. Crowhurst

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2022 Feb 1.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2021 Feb; 1869(2): 140576. Published online 2020 Nov 27. doi: 10.1016/j.bbapap.2020.140576

PMCID:: PMC8221390

Abstract Article PDF–2.1M

Select item 63981192.

Structural basis and mechanism of the unfolding-induced activation of HdeA, a bacterial acid response chaperone

Xing-Chi Yu, Yunfei Hu, Jienv Ding, Hongwei Li, Changwen Jin

J Biol Chem. 2019 Mar 1; 294(9): 3192–3206. Published online 2018 Dec 20. doi: 10.1074/jbc.RA118.006398

PMCID:: PMC6398119

Abstract Article PDF–3.8M

Select item 46553643.

HdeB chaperone activity is coupled to its intrinsic dynamic properties

Jienv Ding, Chengfeng Yang, Xiaogang Niu, Yunfei Hu, Changwen Jin

Sci Rep. 2015; 5: 16856. Published online 2015 Nov 23. doi: 10.1038/srep16856

PMCID:: PMC4655364

Abstract Article PDF–1.5M

Select item 39267424.

NMR-monitored titration of acid-stress bacterial chaperone HdeA reveals that Asp and Glu charge neutralization produces a loosened dimer structure in preparation for protein unfolding and chaperone activation

McKinzie A Garrison, Karin A Crowhurst

Protein Sci. 2014 Feb; 23(2): 167–178. Published online 2013 Dec 23. doi: 10.1002/pro.2402

PMCID:: PMC3926742

Abstract Article PDF–627K

Select item 36193405.

Chaperone activation by unfolding

Linda Foit, Jenny S. George, Bin W. Zhang, Charles L. Brooks, III, James C. A. Bardwell

Proc Natl Acad Sci U S A. 2013 Apr 2; 110(14): E1254–E1262. Published online 2013 Mar 4. doi: 10.1073/pnas.1222458110

PMCID:: PMC3619340

Abstract Article PDF–1.3M

Select item 35928466.

Escherichia coli K-12 Survives Anaerobic Exposure at pH 2 without RpoS, Gad, or Hydrogenases, but Shows Sensitivity to Autoclaved Broth Products

Daniel P. Riggins, Maria J. Narvaez, Keith A. Martinez, Mark M. Harden, Joan L. Slonczewski

PLoS One. 2013; 8(3): e56796. Published online 2013 Mar 8. doi: 10.1371/journal.pone.0056796

PMCID:: PMC3592846

Abstract Article PDF–342K

Select item 32730187.

Evolutionary Silence of the Acid Chaperone Protein HdeB in Enterohemorrhagic Escherichia coli O157:H7

Michelle Q. Carter, Jacqueline W. Louie, Clifton K. Fagerquist, Omar Sultan, William G. Miller, Robert E. Mandrell

Appl Environ Microbiol. 2012 Feb; 78(4): 1004–1014. doi: 10.1128/AEM.07033-11

PMCID:: PMC3273018

Abstract Article PDF–887K

Select item 28031408.

Protein refolding by pH-triggered chaperone binding and release

Timothy L. Tapley, Titus M. Franzmann, Sumita Chakraborty, Ursula Jakob, James C. A. Bardwell

Proc Natl Acad Sci U S A. 2010 Jan 19; 107(3): 1071–1076. Published online 2009 Dec 31. doi: 10.1073/pnas.0911610107

PMCID:: PMC2803140

Abstract Article PDF–905K

Select item 26600629.

Structural plasticity of an acid-activated chaperone allows promiscuous substrate binding

Timothy L. Tapley, Jan L. Körner, Madhuri T. Barge, Julia Hupfeld, Joseph A. Schauerte, Ari Gafni, Ursula Jakob, James C. A. Bardwell

Proc Natl Acad Sci U S A. 2009 Apr 7; 106(14): 5557–5562. Published online 2009 Mar 24. doi: 10.1073/pnas.0811811106

PMCID:: PMC2660062

Abstract Article PDF–832K

Select item 223818810.

Role of the Multidrug Resistance Regulator MarA in Global Regulation of the hdeAB Acid Resistance Operon in Escherichia coli

Cristian Ruiz, Laura M. McMurry, Stuart B. Levy

J Bacteriol. 2008 Feb; 190(4): 1290–1297. Published online 2007 Dec 14. doi: 10.1128/JB.01729-07

PMCID:: PMC2238188

Abstract Article PDF–458K

Select item 189917611.

Indole is an inter-species biofilm signal mediated by SdiA

Jintae Lee, Arul Jayaraman, Thomas K Wood

BMC Microbiol. 2007; 7: 42. Published online 2007 May 18. doi: 10.1186/1471-2180-7-42

PMCID:: PMC1899176

Abstract Article PDF–593K

Select item 185579712.

Products of the Escherichia coli Acid Fitness Island Attenuate Metabolite Stress at Extremely Low pH and Mediate a Cell Density-Dependent Acid Resistance

Aaron K. Mates, Atef K. Sayed, John W. Foster

J Bacteriol. 2007 Apr; 189(7): 2759–2768. Published online 2007 Jan 26. doi: 10.1128/JB.01490-06

PMCID:: PMC1855797

Abstract Article PDF–519K

Select item 179739413.

Escherichia coli HdeB Is an Acid Stress Chaperone

Renée Kern, Abderrahim Malki, Jad Abdallah, Jihen Tagourti, Gilbert Richarme

J Bacteriol. 2007 Jan; 189(2): 603–610. Published online 2006 Nov 3. doi: 10.1128/JB.01522-06

PMCID:: PMC1797394

Abstract Article PDF–288K

Select item 168148114.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 132520015.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405