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Items: 1 to 20 of 38

1.
Metabolic cofactors NADH and FAD act as non-canonical initiating substrates for a primase and affect replication primer processing in vitro
Christina Julius, Paula S Salgado, Yulia Yuzenkova
Nucleic Acids Res. 2020 Jul 27; 48(13): 7298–7306. Published online 2020 May 28. doi: 10.1093/nar/gkaa447
PMCID:
PMC7367122
AbstractArticlePDF–3.9M
2.
Mechanisms of bacterial DNA replication restart
Tricia A Windgassen, Sarah R Wessel, Basudeb Bhattacharyya, James L Keck
Nucleic Acids Res. 2018 Jan 25; 46(2): 504–519. Published online 2017 Nov 30. doi: 10.1093/nar/gkx1203
PMCID:
PMC5778457
AbstractArticlePDF–1.3M
3.
DnaC, the indispensable companion of DnaB helicase, controls the accessibility of DnaB helicase by primase
Magdalena M. Felczak, Sundari Chodavarapu, Jon M. Kaguni
J Biol Chem. 2017 Dec 22; 292(51): 20871–20882. Published online 2017 Oct 25. doi: 10.1074/jbc.M117.807644
PMCID:
PMC5743064
AbstractArticlePDF–1.4M
4.
Cooperative base pair melting by helicase and polymerase positioned one nucleotide from each other
Divya Nandakumar, Manjula Pandey, Smita S Patel
eLife. 2015; 4: e06562. Published online 2015 May 13. doi: 10.7554/eLife.06562
PMCID:
PMC4460406
AbstractArticlePDF–2.6M
5.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
6.
The helicase-binding domain of Escherichia coli DnaG primase interacts with the highly conserved C-terminal region of single-stranded DNA-binding protein
Natalie Naue, Monika Beerbaum, Andrea Bogutzki, Peter Schmieder, Ute Curth
Nucleic Acids Res. 2013 Apr; 41(8): 4507–4517. Published online 2013 Feb 20. doi: 10.1093/nar/gkt107
PMCID:
PMC3632105
AbstractArticlePDF–2.7M
7.
Domain swapping reveals that the C- and N-terminal domains of DnaG and DnaB, respectively, are functional homologues
Kiran Chintakayala, Marilynn A. Larson, William H. Grainger, David J. Scott, Mark A. Griep, Steven H. Hinrichs, Panos Soultanas
Mol Microbiol. Author manuscript; available in PMC 2011 Feb 8.
Published in final edited form as: Mol Microbiol. 2007 Mar; 63(6): 1629–1639. doi: 10.1111/j.1365-2958.2007.05617.x
PMCID:
PMC3035176
AbstractArticlePDF–735K
8.
The Bacterial Helicase-Primase Interaction: A Common Structural/Functional Module
Panos Soultanas
Structure. Author manuscript; available in PMC 2011 Feb 4.
Published in final edited form as: Structure. 2005 Jun; 13(6): 839–844. doi: 10.1016/j.str.2005.04.006
PMCID:
PMC3033576
AbstractArticlePDF–1.1M
9.
Are minichromosomes valid model systems for DNA replication control? Lessons learned from Escherichia coli
Tsuneaki Asai, David B. Bates, Erik Boye, Tokio Kogoma
Mol Microbiol. Author manuscript; available in PMC 2010 Nov 11.
Published in final edited form as: Mol Microbiol. 1998 Aug; 29(3): 671–675. doi: 10.1046/j.1365-2958.1998.00901.x
PMCID:
PMC2978670
AbstractArticlePDF–54K
10.
Single-Molecule Studies of Fork Dynamics of Escherichia coli DNA Replication
Tanner Nathan A., Hamdan Samir M., Jergic Slobodan, Loscha Karin V., Schaeffer Patrick M., Dixon Nicholas E., van Oijen Antoine M.
Nat Struct Mol Biol. Author manuscript; available in PMC 2009 Mar 5.
Published in final edited form as: Nat Struct Mol Biol. 2008 Feb; 15(2): 170–176. Published online 2008 Jan 27. doi: 10.1038/nsmb.1381
Correction in:
volume 15 on page 998
PMCID:
PMC2651573
AbstractArticlePDF–2.0M
11.
Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks
John P. Rooney, Ajish D. George, Ashish Patil, Ulrike Begley, Erin Bessette, Maria R. Zappala, Xin Huang, Douglas A. Conklin, Richard P. Cunningham, Thomas J. Begley
Genomics. Author manuscript; available in PMC 2010 Jan 1.
Published in final edited form as: Genomics. 2009 Jan; 93(1): 42–51. Published online 2008 Oct 16. doi: 10.1016/j.ygeno.2008.09.001
PMCID:
PMC2633870
AbstractArticlePDF–1.9M
12.
THE TRI-FRAME MODEL
Elsje Pienaar, Hendrik J. Viljoen
J Theor Biol. Author manuscript; available in PMC 2009 Apr 21.
Published in final edited form as: J Theor Biol. 2008 Apr 21; 251(4): 616–627. Published online 2007 Dec 14. doi: 10.1016/j.jtbi.2007.12.003
PMCID:
PMC2444053
AbstractArticlePDF–1.9M
13.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
14.
Role of Conserved Amino Acids in the Catalytic Activity of Escherichia coli Primase
Anna Rodina, G. Nigel Godson
J Bacteriol. 2006 May; 188(10): 3614–3621. doi: 10.1128/JB.188.10.3614-3621.2006
PMCID:
PMC1482863
AbstractArticlePDF–434K
15.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
16.
Phenethyl Alcohol Resistance in ESCHERICHIA COLI. III. a Temperature-Sensitive Mutation (dnaP) Affecting DNA Replication
Chieko Wada, Takashi Yura
Genetics. 1974 Jun; 77(2): 199–220. doi: 10.1093/genetics/77.2.199
PMCID:
PMC1213124
SummaryPDF–1.5M
17.
Isolation and Characterization of Suppressors of Two Escherichia Coli Dnag Mutations, Dnag2903 and Parb
R. A. Britton, J. R. Lupski
Genetics. 1997 Apr; 145(4): 867–875. doi: 10.1093/genetics/145.4.867
PMCID:
PMC1207892
SummaryPDF–4.6M
18.
Requirement of IS911 replication before integration defines a new bacterial transposition pathway
G Duval-Valentin, B Marty-Cointin, M Chandler
EMBO J. 2004 Sep 29; 23(19): 3897–3906. Published online 2004 Sep 9. doi: 10.1038/sj.emboj.7600395
PMCID:
PMC522794
AbstractArticlePDF–223K
19.
Migration of Escherichia coli dnaB protein on the template DNA strand as a mechanism in initiating DNA replication
Roger McMacken, Kunihiro Ueda, Arthur Kornberg
Proc Natl Acad Sci U S A. 1977 Oct; 74(10): 4190–4194. doi: 10.1073/pnas.74.10.4190
PMCID:
PMC431904
SummaryPage BrowsePDF–1.1M
20.
Isolation and characterization of transducing phage coding for sigma subunit of Escherichia coli RNA polymerase.
C A Gross, F R Blattner, W E Taylor, P A Lowe, R R Burgess
Proc Natl Acad Sci U S A. 1979 Nov; 76(11): 5789–5793. doi: 10.1073/pnas.76.11.5789
PMCID:
PMC411736
SummaryPage BrowsePDF–1.8M

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