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Items: 15

Select item 22425541.

Identification of cognate ligands for the Escherichia coli phnD protein product and engineering of a reagentless fluorescent biosensor for phosphonates

Shahir S. Rizk, Matthew J. Cuneo, Homme W. Hellinga

Protein Sci. 2006 Jul; 15(7): 1745–1751. doi: 10.1110/ps.062135206

PMCID:: PMC2242554

Abstract Article PDF–261K

Select item 21427892.

Sequence relationships between integral inner membrane proteins of binding protein-dependent transport systems: evolution by recurrent gene duplications.

W. Saurin, E. Dassa

Protein Sci. 1994 Feb; 3(2): 325–344. doi: 10.1002/pro.5560030216

PMCID:: PMC2142789

Summary PDF–1.7M

Select item 16814813.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14570524.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 13343855.

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

Milton H. Saier, Jr, Can V. Tran, Ravi D. Barabote

Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D181–D186. Published online 2005 Dec 28. doi: 10.1093/nar/gkj001

PMCID:: PMC1334385

Abstract Article PDF–550K

Select item 13252006.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 5151597.

Reversible Phase Variation in the phnE Gene, Which Is Required for Phosphonate Metabolism in Escherichia coli K-12

Samina Iqbal, George Parker, Helen Davidson, Elham Moslehi-Rahmani, Robert L. Robson

J Bacteriol. 2004 Sep; 186(18): 6118–6123. doi: 10.1128/JB.186.18.6118-6123.2004

PMCID:: PMC515159

Abstract Article PDF–344K

Select item 3069978.

Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes.

V Burland, G Plunkett, 3rd, H J Sofia, D L Daniels, F R Blattner

Nucleic Acids Res. 1995 Jun 25; 23(12): 2105–2119. doi: 10.1093/nar/23.12.2105

PMCID:: PMC306997

Summary Page Browse PDF–2.5M

Select item 2120129.

Involvement of the phosphate regulon and the psiD locus in carbon-phosphorus lyase activity of Escherichia coli K-12.

L P Wackett, B L Wanner, C P Venditti, C T Walsh

J Bacteriol. 1987 Apr; 169(4): 1753–1756. doi: 10.1128/jb.169.4.1753-1756.1987

PMCID:: PMC212012

Summary Page Browse PDF–675K

Select item 20912410.

Identification of phosphate starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu d1) transcriptional fusions.

W W Metcalf, P M Steed, B L Wanner

J Bacteriol. 1990 Jun; 172(6): 3191–3200. doi: 10.1128/jb.172.6.3191-3200.1990

PMCID:: PMC209124

Summary Page Browse PDF–2.1M

Select item 20858311.

Mapping and molecular cloning of the phn (psiD) locus for phosphonate utilization in Escherichia coli.

B L Wanner, J A Boline

J Bacteriol. 1990 Mar; 172(3): 1186–1196. doi: 10.1128/jb.172.3.1186-1196.1990

PMCID:: PMC208583

Summary Page Browse PDF–2.3M

Select item 20783512.

Molecular analysis of the cryptic and functional phn operons for phosphonate use in Escherichia coli K-12.

K Makino, S K Kim, H Shinagawa, M Amemura, A Nakata

J Bacteriol. 1991 Apr; 173(8): 2665–2672. doi: 10.1128/jb.173.8.2665-2672.1991

PMCID:: PMC207835

Summary Page Browse PDF–1.6M

Select item 20704913.

Involvement of the Escherichia coli phn (psiD) gene cluster in assimilation of phosphorus in the form of phosphonates, phosphite, Pi esters, and Pi.

W W Metcalf, B L Wanner

J Bacteriol. 1991 Jan; 173(2): 587–600. doi: 10.1128/jb.173.2.587-600.1991

PMCID:: PMC207049

Summary Page Browse PDF–2.7M

Select item 20474214.

Mutational analysis of an Escherichia coli fourteen-gene operon for phosphonate degradation, using TnphoA' elements.

W W Metcalf, B L Wanner

J Bacteriol. 1993 Jun; 175(11): 3430–3442. doi: 10.1128/jb.175.11.3430-3442.1993

PMCID:: PMC204742

Summary Page Browse PDF–2.6M

Select item 10643215.

phnE and glpT Genes Enhance Utilization of Organophosphates in Escherichia coli K-12

Ilya Elashvili, Joseph J. DeFrank, Valeria C. Culotta

Appl Environ Microbiol. 1998 Jul; 64(7): 2601–2608. doi: 10.1128/aem.64.7.2601-2608.1998

PMCID:: PMC106432

Abstract Article PDF–1.0M

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