PMC Links for GEO Profiles (Select 35547637) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 87

<< First< Prev

Page of 5

Select item 107557851.

Structure of phosphorylated-like RssB, the adaptor delivering σ^s to the ClpXP proteolytic machinery, reveals an interface switch for activation

Christiane Brugger, Jacob Schwartz, Scott Novick, Song Tong, Joel R. Hoskins, Nadim Majdalani, Rebecca Kim, Martin Filipovski, Sue Wickner, Susan Gottesman, Patrick R. Griffin, Alexandra M. Deaconescu

J Biol Chem. 2023 Dec; 299(12): 105440. Published online 2023 Nov 9. doi: 10.1016/j.jbc.2023.105440

PMCID:: PMC10755785

Abstract Article PDF–3.9M

Select item 96749772.

The activated ClpP peptidase forcefully grips a protein substrate

Steven D. Walker, Adrian O. Olivares

Biophys J. 2022 Oct 18; 121(20): 3907–3916. Published online 2022 Aug 31. doi: 10.1016/j.bpj.2022.08.042

PMCID:: PMC9674977

Abstract Article PDF–1.2M

Select item 96633083.

AAA+ protease-adaptor structures reveal altered conformations and ring specialization

Sora Kim, Xue Fei, Robert T. Sauer, Tania A. Baker

Nat Struct Mol Biol. 2022; 29(11): 1068–1079. Published online 2022 Nov 3. doi: 10.1038/s41594-022-00850-3

PMCID:: PMC9663308

Abstract Article PDF–9.7M

Select item 86666774.

Division of labor between the pore-1 loops of the D1 and D2 AAA+ rings coordinates substrate selectivity of the ClpAP protease

Kristin L. Zuromski, Sora Kim, Robert T. Sauer, Tania A. Baker

J Biol Chem. 2021 Dec; 297(6): 101407. Published online 2021 Nov 12. doi: 10.1016/j.jbc.2021.101407

PMCID:: PMC8666677

Abstract Article PDF–2.9M

Select item 82607935.

A split protease-E. coli ClpXP system quantifies protein–protein interactions in Escherichia coli cells

Shengchen Wang, Faying Zhang, Meng Mei, Ting Wang, Yueli Yun, Shihui Yang, Guimin Zhang, Li Yi

Commun Biol. 2021; 4: 841. Published online 2021 Jul 6. doi: 10.1038/s42003-021-02374-w

PMCID:: PMC8260793

Abstract Article PDF–2.3M

Select item 78574896.

Degradation of MinD oscillator complexes by Escherichia coli ClpXP

Christopher J. LaBreck, Catherine E. Trebino, Colby N. Ferreira, Josiah J. Morrison, Eric C. DiBiasio, Joseph Conti, Jodi L. Camberg

J Biol Chem. 2021 Jan-Jun; 296: 100162. Published online 2020 Dec 10. doi: 10.1074/jbc.RA120.013866

PMCID:: PMC7857489

Abstract Article PDF–1.6M

Select item 77078177.

ClpAP proteolysis does not require rotation of the ClpA unfoldase relative to ClpP

Sora Kim, Kristin L Zuromski, Tristan A Bell, Robert T Sauer, Tania A Baker

eLife. 2020; 9: e61451. Published online 2020 Dec 1. doi: 10.7554/eLife.61451

PMCID:: PMC7707817

Abstract Article PDF–2.5M

Select item 75291488.

Conformational Plasticity of the ClpAP AAA+ Protease Couples Protein Unfolding and Proteolysis

Kyle E. Lopez, Alexandrea N. Rizo, Eric Tse, JiaBei Lin, Nathaniel W. Scull, Aye C. Thwin, Aaron L. Lucius, James Shorter, Daniel R. Southworth

Nat Struct Mol Biol. Author manuscript; available in PMC 2020 Oct 1.

Published in final edited form as: Nat Struct Mol Biol. 2020 May; 27(5): 406–416. Published online 2020 Apr 20. doi: 10.1038/s41594-020-0409-5

PMCID:: PMC7529148

Abstract Article PDF–3.1M

Select item 61914569.

ClpAP protease is a universal factor that activates the parDE toxin-antitoxin system from a broad host range RK2 plasmid

Andrzej Dubiel, Katarzyna Wegrzyn, Adam P. Kupinski, Igor Konieczny

Sci Rep. 2018; 8: 15287. Published online 2018 Oct 16. doi: 10.1038/s41598-018-33726-y

PMCID:: PMC6191456

Abstract Article PDF–2.1M

Select item 442405410.

Subunit asymmetry and roles of conformational switching in the hexameric AAA+ ring of ClpX

Benjamin M. Stinson, Vladimir Baytshtok, Karl R. Schmitz, Tania A. Baker, Robert T. Sauer

Nat Struct Mol Biol. Author manuscript; available in PMC 2015 Nov 1.

Published in final edited form as: Nat Struct Mol Biol. 2015 May; 22(5): 411–416. Published online 2015 Apr 13. doi: 10.1038/nsmb.3012

PMCID:: PMC4424054

Abstract Article PDF–1.0M

Select item 437723411.

The asymmetry in the mature amino-terminus of ClpP facilitates a local symmetry match in ClpAP and ClpXP complexes

Maria C. Bewley, Vito Graziano, Kathleen Griffin, John M. Flanagan

J Struct Biol. Author manuscript; available in PMC 2015 Mar 29.

Published in final edited form as: J Struct Biol. 2006 Feb; 153(2): 113–128. Published online 2005 Dec 1. doi: 10.1016/j.jsb.2005.09.011

PMCID:: PMC4377234

Abstract Article PDF–2.3M

Select item 423173712.

ClpXP protease targets long-lived DNA translocation states of a helicase-like motor to cause restriction alleviation

Michelle Simons, Fiona M. Diffin, Mark D. Szczelkun

Nucleic Acids Res. 2014 Oct 29; 42(19): 12082–12091. Published online 2014 Sep 26. doi: 10.1093/nar/gku851

PMCID:: PMC4231737

Abstract Article PDF–1.9M

Select item 412385513.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 401428714.

A Second-generation Protein–Protein Interaction Network of Helicobacter pylori

Roman Häuser, Arnaud Ceol, Seesandra V. Rajagopala, Roberto Mosca, Gabriella Siszler, Nadja Wermke, Patricia Sikorski, Frank Schwarz, Matthias Schick, Stefan Wuchty, Patrick Aloy, Peter Uetz

Mol Cell Proteomics. 2014 May; 13(5): 1318–1329. Published online 2014 Mar 13. doi: 10.1074/mcp.O113.033571

PMCID:: PMC4014287

Abstract Article PDF–2.2M

Select item 391867415.

E. coli ClpA Catalyzed Polypeptide Translocation Is Allosterically Controlled by the Protease ClpP

Justin M. Miller, Jiabei Lin, Tao Li, Aaron L. Lucius

J Mol Biol. Author manuscript; available in PMC 2014 Aug 9.

Published in final edited form as: J Mol Biol. 2013 Aug 9; 425(15): 2795–2812. Published online 2013 Apr 29. doi: 10.1016/j.jmb.2013.04.019

PMCID:: PMC3918674

Abstract Article PDF–1.3M

Select item 368610016.

ClpX(P) Generates Mechanical Force to Unfold and Translocate Its Protein Substrates

Rodrigo A. Maillard, Gheorghe Chistol, Maya Sen, Maurizio Righini, Jiongyi Tan, Christian M. Kaiser, Courtney Hodges, Andreas Martin, Carlos Bustamante

Cell. Author manuscript; available in PMC 2013 Jun 19.

Published in final edited form as: Cell. 2011 Apr 29; 145(3): 459–469. doi: 10.1016/j.cell.2011.04.010