PMC Links for GEO Profiles (Select 35553540) - PMC

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Items: 13

Select item 41238551.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 31653922.

Determining the Extremes of the Cellular NAD(H) Level by Using an Escherichia coli NAD⁺-Auxotrophic Mutant

Yongjin Zhou, Lei Wang, Fan Yang, Xinping Lin, Sufang Zhang, Zongbao K. Zhao

Appl Environ Microbiol. 2011 Sep; 77(17): 6133–6140. doi: 10.1128/AEM.00630-11

PMCID:: PMC3165392

Abstract Article PDF–926K

Select item 26208143.

The Crp-Activated Small Noncoding Regulatory RNA CyaR (RyeE) Links Nutritional Status to Group Behavior

Nicholas De Lay, Susan Gottesman

J Bacteriol. 2009 Jan; 191(2): 461–476. Published online 2008 Oct 31. doi: 10.1128/JB.01157-08

PMCID:: PMC2620814

Abstract Article PDF–1019K

Select item 22921774.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 16814825.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori

Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050

PMCID:: PMC1681482

Abstract Article PDF–400K

Select item 16814816.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14570527.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 13252008.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 2117629.

Complementation of nitrogen-regulatory (ntr-like) mutations in Rhodobacter capsulatus by an Escherichia coli gene: cloning and sequencing of the gene and characterization of the gene product.

P Allibert, J C Willison, P M Vignais

J Bacteriol. 1987 Jan; 169(1): 260–271. doi: 10.1128/jb.169.1.260-271.1987

PMCID:: PMC211762

Summary Page Browse PDF–2.5M

Select item 21077110.

Location of an ntr-like gene on the physical map of Escherichia coli.

S Kim, D L Wulff

J Bacteriol. 1990 Dec; 172(12): 6619. doi: 10.1128/jb.172.12.6619.1990

PMCID:: PMC210771

Summary Page Browse PDF–104K

Select item 20653211.

An essential gene (efg) located at 38.1 minutes on the Escherichia coli chromosome.

J C Willison

J Bacteriol. 1992 Sep; 174(17): 5765–5766. doi: 10.1128/jb.174.17.5765-5766.1992

PMCID:: PMC206532

Summary Page Browse PDF–226K

Select item 20551612.

The Escherichia coli efg gene and the Rhodobacter capsulatus adgA gene code for NH3-dependent NAD synthetase.

J C Willison, G Tissot

J Bacteriol. 1994 Jun; 176(11): 3400–3402. doi: 10.1128/jb.176.11.3400-3402.1994

PMCID:: PMC205516

Summary Page Browse PDF–684K

Select item 13522913.

From Genetic Footprinting to Antimicrobial Drug Targets: Examples in Cofactor Biosynthetic Pathways

Svetlana Y. Gerdes, Michael D. Scholle, Mark D'Souza, Axel Bernal, Mark V. Baev, Michael Farrell, Oleg V. Kurnasov, Matthew D. Daugherty, Faika Mseeh, Boris M. Polanuyer, John W. Campbell, Shubha Anantha, Konstantin Y. Shatalin, Shamim A. K. Chowdhury, Michael Y. Fonstein, Andrei L. Osterman

J Bacteriol. 2002 Aug; 184(16): 4555–4572. doi: 10.1128/JB.184.16.4555-4572.2002