PMC Links for GEO Profiles (Select 35555315) - PMC - NCBI

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Items: 14

Select item 49183531.

Decoding genome-wide GadEWX-transcriptional regulatory networks reveals multifaceted cellular responses to acid stress in Escherichia coli

Sang Woo Seo, Donghyuk Kim, Edward J. O'Brien, Richard Szubin, Bernhard O. Palsson

Nat Commun. 2015; 6: 7970. Published online 2015 Aug 10. doi: 10.1038/ncomms8970

PMCID:: PMC4918353

Abstract Article PDF–653K

Select item 16982152.

Mechanisms of Transcription Activation Exerted by GadX and GadW at the gadA and gadBC Gene Promoters of the Glutamate-Based Acid Resistance System in Escherichia coli

Angela Tramonti, Michele De Canio, Isabel Delany, Vincenzo Scarlato, Daniela De Biase

J Bacteriol. 2006 Dec; 188(23): 8118–8127. Published online 2006 Sep 15. doi: 10.1128/JB.01044-06

PMCID:: PMC1698215

Abstract Article PDF–564K

Select item 16814813.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 13615604.

Loss of topoisomerase I function affects the RpoS-dependent and GAD systems of acid resistance in Escherichia coli

Natalee Stewart, Jingyang Feng, Xiaoping Liu, Devyani Chaudhuri, John W. Foster, Marc Drolet, Yuk-Ching Tse-Dinh

Microbiology (Reading) Author manuscript; available in PMC 2006 Aug 1.

Published in final edited form as: Microbiology (Reading). 2005 Aug; 151(Pt 8): 2783–2791. doi: 10.1099/mic.0.28022-0

PMCID:: PMC1361560

Abstract Article PDF–594K

Select item 13252005.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 5221956.

GadY, a Small-RNA Regulator of Acid Response Genes in Escherichia coli

Jason A. Opdyke, Ju-Gyeong Kang, Gisela Storz

J Bacteriol. 2004 Oct; 186(20): 6698–6705. doi: 10.1128/JB.186.20.6698-6705.2004

PMCID:: PMC522195

Abstract Article PDF–253K

Select item 3092107.

The XylS/AraC family of regulators.

M T Gallegos, C Michán, J L Ramos

Nucleic Acids Res. 1993 Feb 25; 21(4): 807–810. doi: 10.1093/nar/21.4.807

PMCID:: PMC309210

Summary Page Browse PDF–840K

Select item 3082128.

Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes.

H J Sofia, V Burland, D L Daniels, G Plunkett, 3rd, F R Blattner

Nucleic Acids Res. 1994 Jul 11; 22(13): 2576–2586. doi: 10.1093/nar/22.13.2576

PMCID:: PMC308212

Summary Page Browse PDF–2.3M

Select item 2627099.

pH-Dependent Modulation of Cyclic AMP Levels and GadW-Dependent Repression of RpoS Affect Synthesis of the GadX Regulator and Escherichia coli Acid Resistance

Zhuo Ma, Hope Richard, John W. Foster

J Bacteriol. 2003 Dec; 185(23): 6852–6859. doi: 10.1128/JB.185.23.6852-6859.2003

PMCID:: PMC262709

Abstract Article PDF–728K

Select item 23261710.

Arac/XylS family of transcriptional regulators.

M T Gallegos, R Schleif, A Bairoch, K Hofmann, J L Ramos

Microbiol Mol Biol Rev. 1997 Dec; 61(4): 393–410. doi: 10.1128/mmbr.61.4.393-410.1997

PMCID:: PMC232617

Summary PDF–702K

Select item 16575411.

Transcriptional Expression of Escherichia coli Glutamate-Dependent Acid Resistance Genes gadA and gadBC in an hns rpoS Mutant

Scott R. Waterman, P. L. C. Small

J Bacteriol. 2003 Aug; 185(15): 4644–4647. doi: 10.1128/JB.185.15.4644-4647.2003

PMCID:: PMC165754

Abstract Article PDF–146K

Select item 15407912.

Genes of the GadX-GadW Regulon in Escherichia coli

Don L. Tucker, Nancy Tucker, Zhuo Ma, John W. Foster, Regina L. Miranda, Paul S. Cohen, Tyrrell Conway

J Bacteriol. 2003 May; 185(10): 3190–3201. doi: 10.1128/JB.185.10.3190-3201.2003

PMCID:: PMC154079

Abstract Article PDF–2.7M

Select item 13547613.

Collaborative Regulation of Escherichia coli Glutamate-Dependent Acid Resistance by Two AraC-Like Regulators, GadX and GadW (YhiW)

Zhuo Ma, Hope Richard, Don L. Tucker, Tyrrell Conway, John W. Foster

J Bacteriol. 2002 Dec; 184(24): 7001–7012. doi: 10.1128/JB.184.24.7001-7012.2002

PMCID:: PMC135476

Abstract Article PDF–1.3M

Select item 13503914.

Functional Characterization and Regulation of gadX, a Gene Encoding an AraC/XylS-Like Transcriptional Activator of the Escherichia coli Glutamic Acid Decarboxylase System

Angela Tramonti, Paolo Visca, Michele De Canio, Maurizio Falconi, Daniela De Biase

J Bacteriol. 2002 May; 184(10): 2603–2613. doi: 10.1128/JB.184.10.2603-2613.2002

PMCID:: PMC135039

Abstract Article PDF–1.3M

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