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Items: 1 to 20 of 65

1.
The lactose repressor system: paradigms for regulation, allosteric behavior and protein folding
C. J. Wilson, H. Zhan, L. Swint-Kruse, K. S. Matthews
Cell Mol Life Sci. 2007 Jan; 64(1): 3–16. Published online 2006 Nov 13. doi: 10.1007/s00018-006-6296-z
PMCID:
PMC11136226
AbstractArticlePDF–634K
2.
Rheostat functional outcomes occur when substitutions are introduced at nonconserved positions that diverge with speciation
Liskin Swint‐Kruse, Tyler A. Martin, Braelyn M. Page, Tiffany Wu, Paige M. Gerhart, Larissa L. Dougherty, Qingling Tang, Daniel J. Parente, Brian R. Mosier, Leonidas E. Bantis, Aron W. Fenton
Protein Sci. 2021 Sep; 30(9): 1833–1853. Published online 2021 Jun 11. doi: 10.1002/pro.4136
PMCID:
PMC8376419
AbstractArticlePDF–4.8M
3.
The effect of LacI autoregulation on the performance of the lactose utilization system in Escherichia coli
Szabolcs Semsey, Liselotte Jauffred, Zsolt Csiszovszki, János Erdőssy, Viktor Stéger, Sabine Hansen, Sandeep Krishna
Nucleic Acids Res. 2013 Jul; 41(13): 6381–6390. Published online 2013 May 8. doi: 10.1093/nar/gkt351
PMCID:
PMC3711431
AbstractArticlePDF–2.4M
4.
First-principles calculation of DNA looping in tethered particle experiments
Kevin B Towles, John F Beausang, Hernan G Garcia, Rob Phillips, Philip C Nelson
Phys Biol. Author manuscript; available in PMC 2012 Mar 9.
Published in final edited form as: Phys Biol. 2009 Jul 1; 6(2): 025001. Published online 2009 Jul 1. doi: 10.1088/1478-3975/6/2/025001
PMCID:
PMC3298194
AbstractArticlePDF–2.0M
5.
YajL, Prokaryotic Homolog of Parkinsonism-associated Protein DJ-1, Functions as a Covalent Chaperone for Thiol Proteome
Hai-Tuong Le, Valérie Gautier, Fatoum Kthiri, Abderrahim Malki, Nadia Messaoudi, Mouadh Mihoub, Ahmed Landoulsi, Young Jun An, Sun-Shin Cha, Gilbert Richarme
J Biol Chem. 2012 Feb 17; 287(8): 5861–5870. Published online 2011 Dec 7. doi: 10.1074/jbc.M111.299198
PMCID:
PMC3285355
AbstractArticlePDF–1.2M
6.
Altering Residues N125 and D149 Impacts Sugar Effector Binding and Allosteric Parameters in Escherichia coli Lactose Repressor
Jia Xu, Shirley Liu, Mingzhi Chen, Jianpeng Ma, Kathleen S. Matthews
Biochemistry. Author manuscript; available in PMC 2012 Oct 25.
Published in final edited form as: Biochemistry. 2011 Oct 25; 50(42): 9002–9013. Published online 2011 Sep 30. doi: 10.1021/bi200896t
PMCID:
PMC3202982
AbstractArticlePDF–2.8M
7.
Local Gene Regulation Details a Recognition Code within the LacI Transcriptional Factor Family
Francisco M. Camas, Eric J. Alm, Juan F. Poyatos
PLoS Comput Biol. 2010 Nov; 6(11): e1000989. Published online 2010 Nov 11. doi: 10.1371/journal.pcbi.1000989
PMCID:
PMC2978694
AbstractArticlePDF–1.1M
8.
Probing Transcription Factor Dynamics at the Single-Molecule Level in a Living Cell
Johan Elf, Gene-Wei Li, X. Sunney Xie
Science. Author manuscript; available in PMC 2010 Apr 13.
Published in final edited form as: Science. 2007 May 25; 316(5828): 1191–1194. doi: 10.1126/science.1141967
PMCID:
PMC2853898
AbstractArticlePDF–1.9M
9.
A stochastic single-molecule event triggers phenotype switching of a bacterial cell
Paul J. Choi, Long Cai, Kirsten Frieda, X. Sunney Xie
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2008 Oct 17; 322(5900): 442. doi: 10.1126/science.1161427
PMCID:
PMC2819113
AbstractArticlePDF–2.0M
10.
A Novel Molecular Switch
Robert Daber, Mitchell Lewis
J Mol Biol. Author manuscript; available in PMC 2010 Aug 28.
Published in final edited form as: J Mol Biol. 2009 Aug 28; 391(4): 661–670. Published online 2009 Jun 21. doi: 10.1016/j.jmb.2009.06.039
PMCID:
PMC2778020
AbstractArticlePDF–1.6M
11.
Flexibility in the Inducer Binding Region is Crucial for Allostery in the Escherichia coli Lactose Repressor
Jia Xu, Kathleen S. Matthews
Biochemistry. Author manuscript; available in PMC 2010 Jun 9.
Published in final edited form as: Biochemistry. 2009 Jun 9; 48(22): 4988–4998. doi: 10.1021/bi9002343
PMCID:
PMC2772868
AbstractArticlePDF–1.8M
12.
One is Not Enough
Robert Daber, Kim Sharp, Mitchell Lewis
J Mol Biol. Author manuscript; available in PMC 2010 Oct 9.
Published in final edited form as: J Mol Biol. 2009 Oct 9; 392(5): 1133–1144. Published online 2009 Jul 22. doi: 10.1016/j.jmb.2009.07.050
PMCID:
PMC2760156
AbstractArticlePDF–1.6M
13.
Tetramer opening in LacI-mediated DNA looping
Danielis Rutkauskas, Hongli Zhan, Kathleen S. Matthews, Francesco S. Pavone, Francesco Vanzi
Proc Natl Acad Sci U S A. 2009 Sep 29; 106(39): 16627–16632. Published online 2009 Sep 21. doi: 10.1073/pnas.0904617106
PMCID:
PMC2757816
AbstractArticlePDF–1.3M
14.
Enhanced Bacterial Protein Expression During Auto-induction Obtained by Alteration of Lac Repressor Dosage and Medium Composition
Paul G. Blommel, Katie J. Becker, Petar Duvnjak, Brian G. Fox
Biotechnol Prog. Author manuscript; available in PMC 2009 Sep 21.
Published in final edited form as: Biotechnol Prog. 2007 May–Jun; 23(3): 585–598. Published online 2007 May 17. doi: 10.1021/bp070011x
PMCID:
PMC2747370
AbstractArticlePDF–2.0M
15.
Feedback Regulation of Lac Repressor Expression in Escherichia coli
Stefan Oehler
J Bacteriol. 2009 Aug; 191(16): 5301–5303. Published online 2009 Jun 5. doi: 10.1128/JB.00427-09
PMCID:
PMC2725603
AbstractArticlePDF–59K
16.
Structural Analysis of Lac Repressor Bound to Allosteric Effectors
Robert Daber, Steven Stayrook, Allison Rosenberg, Mitchell Lewis
J Mol Biol. Author manuscript; available in PMC 2009 Jul 27.
Published in final edited form as: J Mol Biol. 2007 Jul 20; 370(4): 609–619. Published online 2007 Apr 19. doi: 10.1016/j.jmb.2007.04.028
PMCID:
PMC2715899
AbstractArticlePDF–3.9M
17.
Allostery in the LacI/GalR Family: Variations on a Theme
Liskin Swint-Kruse, Kathleen S. Matthews
Curr Opin Microbiol. Author manuscript; available in PMC 2010 Apr 1.
Published in final edited form as: Curr Opin Microbiol. 2009 Apr; 12(2): 129–137. Published online 2009 Mar 5. doi: 10.1016/j.mib.2009.01.009
PMCID:
PMC2688824
AbstractArticlePDF–1.7M
18.
Facile promoter deletion in Escherichia coli in response to leaky expression of very robust and benign proteins from common expression vectors
Martin Kawe, Uwe Horn, Andreas Plückthun
Microb Cell Fact. 2009; 8: 8. Published online 2009 Jan 26. doi: 10.1186/1475-2859-8-8
PMCID:
PMC2655282
AbstractArticlePDF–1003K
19.
Quantitative approaches to the study of bistability in the lac operon of Escherichia coli
Moisés Santillán, Michael C. Mackey
J R Soc Interface. 2008 Aug 6; 5(Suppl 1): S29–S39. Published online 2008 Apr 15. doi: 10.1098/rsif.2008.0086.focus
PMCID:
PMC2504340
AbstractArticlePDF–289K
20.
Fine-tuning function: Correlation of hinge domain interactions with functional distinctions between LacI and PurR
Liskin Swint-Kruse, Christopher Larson, B. Montgomery Pettitt, Kathleen Shive Matthews
Protein Sci. 2002 Apr; 11(4): 778–794. doi: 10.1110/ps.4050102
PMCID:
PMC2373529
AbstractArticlePDF–9.6M

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