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Select item 64682911.

Dual expression of CCA-adding enzyme and RNase T in Escherichia coli generates a distinct cca growth phenotype with diverse applications

Karolin Wellner, Marie-Theres Pöhler, Heike Betat, Mario Mörl

Nucleic Acids Res. 2019 Apr 23; 47(7): 3631–3639. Published online 2019 Mar 4. doi: 10.1093/nar/gkz133

PMCID:: PMC6468291

Abstract Article PDF–2.2M

Select item 48152242.

Aromatic residues in RNase T stack with nucleobases to guide the sequence‐specific recognition and cleavage of nucleic acids

Yulander Duh, Yu‐Yuan Hsiao, Chia‐Lung Li, Jason C. Huang, Hanna S. Yuan

Protein Sci. 2015 Dec; 24(12): 1934–1941. Published online 2015 Sep 18. doi: 10.1002/pro.2800

PMCID:: PMC4815224

Abstract Article PDF–1.2M

Select item 41238553.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 39423154.

Structural Insights Into DNA Repair by RNase T—An Exonuclease Processing 3′ End of Structured DNA in Repair Pathways

Yu-Yuan Hsiao, Woei-Horng Fang, Chia-Chia Lee, Yi-Ping Chen, Hanna S. Yuan

PLoS Biol. 2014 Mar; 12(3): e1001803. Published online 2014 Mar 4. doi: 10.1371/journal.pbio.1001803

PMCID:: PMC3942315

Abstract Article PDF–1.5M

Select item 28110325.

Processing of the Escherichia coli leuX tRNA transcript, encoding tRNA^Leu5, requires either the 3′→5′ exoribonuclease polynucleotide phosphorylase or RNase P to remove the Rho-independent transcription terminator

Bijoy K. Mohanty, Sidney R. Kushner

Nucleic Acids Res. 2010 Jan; 38(2): 597–607. Published online 2009 Nov 11. doi: 10.1093/nar/gkp997

PMCID:: PMC2811032

Abstract Article PDF–1.7M

Select item 26338706.

Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks

John P. Rooney, Ajish D. George, Ashish Patil, Ulrike Begley, Erin Bessette, Maria R. Zappala, Xin Huang, Douglas A. Conklin, Richard P. Cunningham, Thomas J. Begley

Genomics. Author manuscript; available in PMC 2010 Jan 1.

Published in final edited form as: Genomics. 2009 Jan; 93(1): 42–51. Published online 2008 Oct 16. doi: 10.1016/j.ygeno.2008.09.001

PMCID:: PMC2633870

Abstract Article PDF–1.9M

Select item 19073777.

Crystal Structure of RNase T, an exoribonuclease involved in tRNA maturation and end-turnover

Yuhong Zuo, Heping Zheng, Yong Wang, Maksymilian Chruszcz, Marcin Cymborowski, Tatiana Skarina, Alexei Savchenko, Arun Malhotra, Wladek Minor

Structure. Author manuscript; available in PMC 2008 Apr 1.

Published in final edited form as: Structure. 2007 Apr; 15(4): 417–428. doi: 10.1016/j.str.2007.02.004

PMCID:: PMC1907377

Abstract Article PDF–1.7M

Select item 16814818.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14605219.

Identification of RNase T as a high-copy suppressor of the UV sensitivity associated with single-strand DNA exonuclease deficiency in Escherichia coli.

M Viswanathan, A Lanjuin, S T Lovett

Genetics. 1999 Mar; 151(3): 929–934. doi: 10.1093/genetics/151.3.929

PMCID:: PMC1460521

Summary PDF–101K

Select item 136974610.

Maturation of 23S ribosomal RNA requires the exoribonuclease RNase T.

Z Li, S Pandit, M P Deutscher

RNA. 1999 Jan; 5(1): 139–146. doi: 10.1017/s1355838299981669

PMCID:: PMC1369746

Summary PDF–384K

Select item 132520011.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405