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Select item 43356621.

Enhanced production of gamma-aminobutyrate (GABA) in recombinant Corynebacterium glutamicum by expressing glutamate decarboxylase active in expanded pH range

Jae Woong Choi, Sung Sun Yim, Seung Hwan Lee, Taek Jin Kang, Si Jae Park, Ki Jun Jeong

Microb Cell Fact. 2015; 14: 21. Published online 2015 Feb 15. doi: 10.1186/s12934-015-0205-9

PMCID:: PMC4335662

Abstract Article PDF–1022K

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 35928463.

Escherichia coli K-12 Survives Anaerobic Exposure at pH 2 without RpoS, Gad, or Hydrogenases, but Shows Sensitivity to Autoclaved Broth Products

Daniel P. Riggins, Maria J. Narvaez, Keith A. Martinez, Mark M. Harden, Joan L. Slonczewski

PLoS One. 2013; 8(3): e56796. Published online 2013 Mar 8. doi: 10.1371/journal.pone.0056796

PMCID:: PMC3592846

Abstract Article PDF–342K

Select item 27972294.

Mutation of His⁴⁶⁵ Alters the pH-dependent Spectroscopic Properties of Escherichia coli Glutamate Decarboxylase and Broadens the Range of Its Activity toward More Alkaline pH

Eugenia Pennacchietti, Tijs M. Lammens, Guido Capitani, Maurice C. R. Franssen, Robert A. John, Francesco Bossa, Daniela De Biase

J Biol Chem. 2009 Nov 13; 284(46): 31587–31596. Published online 2009 Sep 21. doi: 10.1074/jbc.M109.049577

PMCID:: PMC2797229

Abstract Article PDF–3.1M

Select item 26486475.

The BLUF-EAL protein YcgF acts as a direct anti-repressor in a blue-light response of Escherichia coli

Natalia Tschowri, Susan Busse, Regine Hengge

Genes Dev. 2009 Feb 15; 23(4): 522–534. doi: 10.1101/gad.499409

PMCID:: PMC2648647

Abstract Article PDF–741K

Select item 18993926.

The Lysine Decarboxylase CadA Protects Escherichia coli Starved of Phosphate against Fermentation Acids

Patrice L. Moreau

J Bacteriol. 2007 Mar; 189(6): 2249–2261. Published online 2007 Jan 5. doi: 10.1128/JB.01306-06

PMCID:: PMC1899392

Abstract Article PDF–513K

Select item 18991767.

Indole is an inter-species biofilm signal mediated by SdiA

Jintae Lee, Arul Jayaraman, Thomas K Wood

BMC Microbiol. 2007; 7: 42. Published online 2007 May 18. doi: 10.1186/1471-2180-7-42

PMCID:: PMC1899176

Abstract Article PDF–593K

Select item 16982158.

Mechanisms of Transcription Activation Exerted by GadX and GadW at the gadA and gadBC Gene Promoters of the Glutamate-Based Acid Resistance System in Escherichia coli

Angela Tramonti, Michele De Canio, Isabel Delany, Vincenzo Scarlato, Daniela De Biase

J Bacteriol. 2006 Dec; 188(23): 8118–8127. Published online 2006 Sep 15. doi: 10.1128/JB.01044-06

PMCID:: PMC1698215

Abstract Article PDF–564K

Select item 16814819.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 147816610.

Escherichia coli acid resistance: pH-sensing, activation by chloride and autoinhibition in GadB

Heinz Gut, Eugenia Pennacchietti, Robert A John, Francesco Bossa, Guido Capitani, Daniela De Biase, Markus G Grütter

EMBO J. 2006 Jun 7; 25(11): 2643–2651. Published online 2006 May 4. doi: 10.1038/sj.emboj.7601107

PMCID:: PMC1478166

Abstract Article PDF–366K

Select item 136156011.

Loss of topoisomerase I function affects the RpoS-dependent and GAD systems of acid resistance in Escherichia coli

Natalee Stewart, Jingyang Feng, Xiaoping Liu, Devyani Chaudhuri, John W. Foster, Marc Drolet, Yuk-Ching Tse-Dinh

Microbiology (Reading) Author manuscript; available in PMC 2006 Aug 1.

Published in final edited form as: Microbiology (Reading). 2005 Aug; 151(Pt 8): 2783–2791. doi: 10.1099/mic.0.28022-0

PMCID:: PMC1361560

Abstract Article PDF–594K

Select item 132520012.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405