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Select item 78037631.

Topoisomerase IV tracks behind the replication fork and the SeqA complex during DNA replication in Escherichia coli

Emily Helgesen, Frank Sætre, Kirsten Skarstad

Sci Rep. 2021; 11: 474. Published online 2021 Jan 12. doi: 10.1038/s41598-020-80043-4

PMCID:: PMC7803763

Abstract Article PDF–1.3M

Select item 50161682.

Escherichia coli Topoisomerase IV E Subunit and an Inhibitor Binding Mode Revealed by NMR Spectroscopy

Yan Li, Ying Lei Wong, Fui Mee Ng, Boping Liu, Yun Xuan Wong, Zhi Ying Poh, Shuang Liu, Siew Wen Then, Michelle Yueqi Lee, Hui Qi Ng, Qiwei Huang, Alvin W. Hung, Joseph Cherian, Jeffrey Hill, Thomas H. Keller, CongBao Kang

J Biol Chem. 2016 Aug 19; 291(34): 17743–17753. Published online 2016 Jun 30. doi: 10.1074/jbc.M116.737429

PMCID:: PMC5016168

Abstract Article PDF–3.9M

Select item 48651073.

Mapping Topoisomerase IV Binding and Activity Sites on the E. coli Genome

Hafez El Sayyed, Ludovic Le Chat, Elise Lebailly, Elise Vickridge, Carine Pages, Francois Cornet, Marco Cosentino Lagomarsino, Olivier Espéli

PLoS Genet. 2016 May; 12(5): e1006025. Published online 2016 May 12. doi: 10.1371/journal.pgen.1006025

PMCID:: PMC4865107

Abstract Article PDF–6.3M

Select item 47383354.

MatP regulates the coordinated action of topoisomerase IV and MukBEF in chromosome segregation

Sophie Nolivos, Amy L. Upton, Anjana Badrinarayanan, Julius Müller, Katarzyna Zawadzka, Jakub Wiktor, Amber Gill, Lidia Arciszewska, Emilien Nicolas, David Sherratt

Nat Commun. 2016; 7: 10466. Published online 2016 Jan 28. doi: 10.1038/ncomms10466

PMCID:: PMC4738335

Abstract Article PDF–4.5M

Select item 41238555.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 27591936.

Actin Homologue MreB Affects Chromosome Segregation by Regulating Topoisomerase IV in Escherichia coli

Ram Madabhushi, Kenneth J. Marians

Mol Cell. Author manuscript; available in PMC 2010 Jan 30.

Published in final edited form as: Mol Cell. 2009 Jan 30; 33(2): 171–180. doi: 10.1016/j.molcel.2009.01.001

PMCID:: PMC2759193

Abstract Article PDF–2.7M

Select item 27496737.

Cohesion by topology: sister chromatids interlocked by DNA

Rodrigo Bermejo, Dana Branzei, Marco Foiani

Genes Dev. 2008 Sep 1; 22(17): 2297–2301. doi: 10.1101/gad.1719308

PMCID:: PMC2749673

Abstract Article PDF–153K

Select item 25329308.

Modulation of Escherichia coli sister chromosome cohesion by topoisomerase IV

Xindan Wang, Rodrigo Reyes-Lamothe, David J. Sherratt

Genes Dev. 2008 Sep 1; 22(17): 2426–2433. doi: 10.1101/gad.487508

PMCID:: PMC2532930

Abstract Article PDF–665K

Select item 24310659.

A Dynamic Polymerase Exchange with Escherichia coli DNA Polymerase IV Replacing DNA Polymerase III on the Sliding Clamp

Asako Furukohri, Myron F. Goodman, Hisaji Maki

J Biol Chem. 2008 Apr 25; 283(17): 11260–11269. doi: 10.1074/jbc.M709689200

PMCID:: PMC2431065

Abstract Article PDF–459K

Select item 229217710.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 179773911.

Dual Targeting of GyrB and ParE by a Novel Aminobenzimidazole Class of Antibacterial Compounds

Trudy H. Grossman, Douglas J. Bartels, Steve Mullin, Christian H. Gross, Jonathan D. Parsons, Yusheng Liao, Anne-Laure Grillot, Dean Stamos, Eric R. Olson, Paul S. Charifson, Nagraj Mani

Antimicrob Agents Chemother. 2007 Feb; 51(2): 657–666. Published online 2006 Nov 20. doi: 10.1128/AAC.00596-06

PMCID:: PMC1797739

Abstract Article PDF–347K

Select item 168148212.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori

Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050

PMCID:: PMC1681482

Abstract Article PDF–400K

Select item 168148113.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 161694514.

High-throughput assays for DNA gyrase and other topoisomerases

Anthony Maxwell, Nicolas P. Burton, Natasha O'Hagan

Nucleic Acids Res. 2006 Sep; 34(15): e104. Published online 2006 Aug 26. doi: 10.1093/nar/gkl504

PMCID:: PMC1616945

Abstract Article PDF–180K

Select item 147575115.

Distribution of gyrase and topoisomerase IV on bacterial nucleoid: implications for nucleoid organization

Ya-Han Hsu, Meng-Wen Chung, Tsai-Kun Li

Nucleic Acids Res. 2006; 34(10): 3128–3138. Published online 2006 Jun 6. doi: 10.1093/nar/gkl392

PMCID:: PMC1475751

Abstract Article PDF–912K

Select item 136653816.

Topoisomerase IV Bends and Overtwists DNA upon Binding

G. Charvin, T. R. Strick, D. Bensimon, V. Croquette

Biophys J. 2005 Jul; 89(1): 384–392. Published online 2005 Apr 29. doi: 10.1529/biophysj.105.060202

PMCID:: PMC1366538

Abstract Article PDF–292K

Select item 132520017.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405