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Select item 48081981.

Fumarate-Mediated Persistence of Escherichia coli against Antibiotics

Jun-Seob Kim, Da-Hyeong Cho, Paul Heo, Suk-Chae Jung, Myungseo Park, Eun-Joong Oh, Jaeyun Sung, Pan-Jun Kim, Suk-Chan Lee, Dae-Hee Lee, Sarah Lee, Choong Hwan Lee, Dongwoo Shin, Yong-Su Jin, Dae-Hyuk Kweon

Antimicrob Agents Chemother. 2016 Apr; 60(4): 2232–2240. Prepublished online 2016 Jan 25. Published online 2016 Mar 25. doi: 10.1128/AAC.01794-15

PMCID:: PMC4808198

Abstract Article PDF–991K

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 32905733.

Out of Plane Distortions of the Heme b of Escherichia coli Succinate Dehydrogenase

Quang M. Tran, Carmen Fong, Richard A. Rothery, Elena Maklashina, Gary Cecchini, Joel H. Weiner

PLoS One. 2012; 7(2): e32641. Published online 2012 Feb 29. doi: 10.1371/journal.pone.0032641

PMCID:: PMC3290573

Abstract Article PDF–513K

Select item 32853554.

YajL, Prokaryotic Homolog of Parkinsonism-associated Protein DJ-1, Functions as a Covalent Chaperone for Thiol Proteome

Hai-Tuong Le, Valérie Gautier, Fatoum Kthiri, Abderrahim Malki, Nadia Messaoudi, Mouadh Mihoub, Ahmed Landoulsi, Young Jun An, Sun-Shin Cha, Gilbert Richarme

J Biol Chem. 2012 Feb 17; 287(8): 5861–5870. Published online 2011 Dec 7. doi: 10.1074/jbc.M111.299198

PMCID:: PMC3285355

Abstract Article PDF–1.2M

Select item 28914005.

The Quinone-Binding and Catalytic Site of Complex II

Elena Maklashina, Gary Cecchini

Biochim Biophys Acta. Author manuscript; available in PMC 2011 Dec 1.

Published in final edited form as: Biochim Biophys Acta. 2010 Dec; 1797(12): 1877–1882. Published online 2010 Feb 20. doi: 10.1016/j.bbabio.2010.02.015

PMCID:: PMC2891400

Abstract Article PDF–252K

Select item 27856146.

Structure of Escherichia coli Succinate:Quinone Oxidoreductase with an Occupied and Empty Quinone-binding Site

Jonathan Ruprecht, Victoria Yankovskaya, Elena Maklashina, So Iwata, Gary Cecchini

J Biol Chem. 2009 Oct 23; 284(43): 29836–29846. Published online 2009 Aug 25. doi: 10.1074/jbc.M109.010058

PMCID:: PMC2785614

Abstract Article PDF–4.1M

Select item 25312817.

Screening of detergents for solubilization, purification and crystallization of membrane proteins: a case study on succinate:ubiquinone oxidoreductase from Escherichia coli

Hironari Shimizu, Coh-ichi Nihei, Daniel Ken Inaoka, Tatushi Mogi, Kiyoshi Kita, Shigeharu Harada

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Sep 1; 64(Pt 9): 858–862. Published online 2008 Aug 29. doi: 10.1107/S1744309108026596

PMCID:: PMC2531281

Abstract Article PDF–259K

Select item 23974898.

A Threonine on the Active Site Loop Controls Transition State Formation in Escherichia coli Respiratory Complex II

Thomas M. Tomasiak, Elena Maklashina, Gary Cecchini, Tina M. Iverson

J Biol Chem. 2008 May 30; 283(22): 15460–15468. doi: 10.1074/jbc.M801372200

PMCID:: PMC2397489

Abstract Article PDF–467K

Select item 21438089.

Covalent attachment of flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN) to enzymes: the current state of affairs.

M. Mewies, W. S. McIntire, N. S. Scrutton

Protein Sci. 1998 Jan; 7(1): 7–20. doi: 10.1002/pro.5560070102

PMCID:: PMC2143808

Summary PDF–3.3M

Select item 208428710.

Escherichia coli succinate dehydrogenase variant lacking the heme b

Quang M. Tran, Richard A. Rothery, Elena Maklashina, Gary Cecchini, Joel H. Weiner

Proc Natl Acad Sci U S A. 2007 Nov 13; 104(46): 18007–18012. Published online 2007 Nov 7. doi: 10.1073/pnas.0707732104

PMCID:: PMC2084287

Abstract Article PDF–582K

Select item 179730911.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 168148112.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 145705213.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520014.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 129770615.

Glucose repression of the Escherichia coli sdhCDAB operon, revisited: regulation by the CRP·cAMP complex

Tae-Wook Nam, Young-Ha Park, Hye-Jin Jeong, Sangryeol Ryu, Yeong-Jae Seok

Nucleic Acids Res. 2005; 33(21): 6712–6722. Published online 2005 Nov 27. doi: 10.1093/nar/gki978

PMCID:: PMC1297706

Abstract Article PDF–383K

Select item 114432516.

Nucleotide sequence encoding the iron-sulphur protein subunit of the succinate dehydrogenase of Escherichia coli.

M G Darlison, J R Guest

Biochem J. 1984 Oct 15; 223(2): 507–517. doi: 10.1042/bj2230507

PMCID:: PMC1144325

Summary Page Browse PDF–1.5M

Select item 114420717.

Nucleotide sequence encoding the flavoprotein and hydrophobic subunits of the succinate dehydrogenase of Escherichia coli.

D Wood, M G Darlison, R J Wilde, J R Guest

Biochem J. 1984 Sep 1; 222(2): 519–534. doi: 10.1042/bj2220519

PMCID:: PMC1144207

Summary Page Browse PDF–2.3M

Select item 40993518.

Carbon nutrition of Escherichia coli in the mouse intestine

Dong-Eun Chang, Darren J. Smalley, Don L. Tucker, Mary P. Leatham, Wendy E. Norris, Sarah J. Stevenson, April B. Anderson, Joe E. Grissom, David C. Laux, Paul S. Cohen, Tyrrell Conway

Proc Natl Acad Sci U S A. 2004 May 11; 101(19): 7427–7432. Published online 2004 May 3. doi: 10.1073/pnas.0307888101