PMC Links for GEO Profiles (Select 35576143) - PMC - NCBI

Result Filters

Links from GEO Profiles

Items: 16

Select item 105733071.

Structural basis for RNA-duplex unwinding by the DEAD-box helicase DbpA

Jan Philip Wurm

RNA. 2023 Sep; 29(9): 1339–1354. doi: 10.1261/rna.079582.123

PMCID:: PMC10573307

Abstract Article PDF–18M

Select item 27706752.

A dominant negative mutant of the E. coli RNA helicase DbpA blocks assembly of the 50S ribosomal subunit

Lisa M. Sharpe Elles, Michael T. Sykes, James R. Williamson, Olke C. Uhlenbeck

Nucleic Acids Res. 2009 Oct; 37(19): 6503–6514. Published online 2009 Sep 4. doi: 10.1093/nar/gkp711

PMCID:: PMC2770675

Abstract Article PDF–868K

Select item 27695643.

Unwinding by local strand separation is critical for the function of DEAD-box proteins as RNA chaperones

Mark Del Campo, Sabine Mohr, Yue Jiang, Huijue Jia, Eckhard Jankowsky, Alan M. Lambowitz

J Mol Biol. Author manuscript; available in PMC 2010 Jun 19.

Published in final edited form as: J Mol Biol. 2009 Jun 19; 389(4): 674–693. Published online 2009 Apr 23. doi: 10.1016/j.jmb.2009.04.043

PMCID:: PMC2769564

Abstract Article PDF–3.6M

Select item 23596514.

The ATPase cycle mechanism of the DEAD-box rRNA helicase, DbpA

Arnon Henn, Wenxiang Cao, David Hackney, Enrique M. De La Cruz

J Mol Biol. Author manuscript; available in PMC 2009 Mar 14.

Published in final edited form as: J Mol Biol. 2008 Mar 14; 377(1): 193–205. Published online 2007 Dec 28. doi: 10.1016/j.jmb.2007.12.046

PMCID:: PMC2359651

Abstract Article PDF–1.7M

Select item 22487675.

Mutation of the arginine finger in the active site of Escherichia coli DbpA abolishes ATPase and helicase activity and confers a dominant slow growth phenotype

Lisa M. Sharpe Elles, Olke C. Uhlenbeck

Nucleic Acids Res. 2008 Jan; 36(1): 41–50. Published online 2007 Nov 5. doi: 10.1093/nar/gkm926

PMCID:: PMC2248767

Abstract Article PDF–306K

Select item 16814816.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 16169577.

DEAD-box RNA helicases in Escherichia coli

Isabelle Iost, Marc Dreyfus

Nucleic Acids Res. 2006 Sep; 34(15): 4189–4197. Published online 2006 Aug 25. doi: 10.1093/nar/gkl500

PMCID:: PMC1616957

Abstract Article PDF–294K

Select item 13701228.

The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA.

C A Tsu, K Kossen, O C Uhlenbeck

RNA. 2001 May; 7(5): 702–709. doi: 10.1017/s1355838201010135

PMCID:: PMC1370122

Summary PDF–917K

Select item 13252009.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 43444510.

Interaction of Escherichia coli DbpA with 23S rRNA in different functional states of the enzyme

Fedor V. Karginov, Olke C. Uhlenbeck

Nucleic Acids Res. 2004; 32(10): 3028–3032. Published online 2004 Jun 1. doi: 10.1093/nar/gkh640

PMCID:: PMC434445

Abstract Article PDF–173K

Select item 41363711.

DbpA: a DEAD box protein specifically activated by 23s rRNA.

F V Fuller-Pace, S M Nicol, A D Reid, D P Lane

EMBO J. 1993 Sep; 12(9): 3619–3626. doi: 10.1002/j.1460-2075.1993.tb06035.x

PMCID:: PMC413637

Summary Page Browse PDF–1.6M

Select item 33221812.

Identification of a putative RNA helicase in E.coli.

R Iggo, S Picksley, J Southgate, J McPheat, D P Lane

Nucleic Acids Res. 1990 Sep 25; 18(18): 5413–5417. doi: 10.1093/nar/18.18.5413

PMCID:: PMC332218

Summary Page Browse PDF–1003K

Select item 14645913.

Characterization of DbpA, an Escherichia coli DEAD box protein with ATP independent RNA unwinding activity.

N Böddeker, K Stade, F Franceschi

Nucleic Acids Res. 1997 Feb 1; 25(3): 537–545. doi: 10.1093/nar/25.3.537

PMCID:: PMC146459

Summary PDF–180K

Select item 12564414.

Escherichia coli DbpA is an RNA helicase that requires hairpin 92 of 23S rRNA

Camille M. Diges, Olke C. Uhlenbeck

EMBO J. 2001 Oct 1; 20(19): 5503–5512. doi: 10.1093/emboj/20.19.5503

PMCID:: PMC125644

Abstract Article PDF–336K

Select item 4046615.

The "DEAD box" protein DbpA interacts specifically with the peptidyltransferase center in 23S rRNA.

S M Nicol, F V Fuller-Pace

Proc Natl Acad Sci U S A. 1995 Dec 5; 92(25): 11681–11685. doi: 10.1073/pnas.92.25.11681

PMCID:: PMC40466

Summary Page Browse PDF–1.2M

Select item 3315416.

Visualization of unwinding activity of duplex RNA by DbpA, a DEAD box helicase, at single-molecule resolution by atomic force microscopy

Arnon Henn, Ohad Medalia, Shu-Ping Shi, Michal Steinberg, Francois Franceschi, Irit Sagi

Proc Natl Acad Sci U S A. 2001 Apr 24; 98(9): 5007–5012. Published online 2001 Apr 10. doi: 10.1073/pnas.071372498

PMCID:: PMC33154

Abstract Article PDF–1006K

Supplemental Content

Filter your results:

All (16)
NIH grants (8)
Embargoed (0)

Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

PMC Links for GEO Profiles (Select 35576143) (16)
PMC

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Literature > PubMed Central (PMC)