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Select item 63386401.

The lipid environment determines the activity of the Escherichia coli ammonium transporter AmtB

Gaëtan Dias Mirandela, Giulia Tamburrino, Paul A. Hoskisson, Ulrich Zachariae, Arnaud Javelle

FASEB J. 2019 Feb; 33(2): 1989–1999. Published online 2018 Sep 13. doi: 10.1096/fj.201800782R

PMCID:: PMC6338640

Abstract Article

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 40875333.

Membrane proteins bind lipids selectively to modulate their structure and function

Arthur Laganowsky, Eamonn Reading, Timothy M. Allison, Martin B. Ulmschneider, Matteo T. Degiacomi, Andrew J. Baldwin, Carol V. Robinson

Nature. Author manuscript; available in PMC 2014 Dec 5.

Published in final edited form as: Nature. 2014 Jun 5; 510(7503): 172–175. doi: 10.1038/nature13419

PMCID:: PMC4087533

Abstract Article PDF–3.6M

Select item 36562654.

The Molecular Basis of K⁺ Exclusion by the Escherichia coli Ammonium Channel AmtB

Jason A. Hall, Dalai Yan

J Biol Chem. 2013 May 17; 288(20): 14080–14086. Published online 2013 Apr 1. doi: 10.1074/jbc.M113.457952

PMCID:: PMC3656265

Abstract Article PDF–1.3M

Select item 27874255.

Genetic Evidence for an Essential Oscillation of Transmembrane-Spanning Segment 5 in the Escherichia coli Ammonium Channel AmtB

William B. Inwood, Jason A. Hall, Kwang-Seo Kim, Rebecca Fong, Sydney Kustu

Genetics. 2009 Dec; 183(4): 1341–1355. doi: 10.1534/genetics.109.109579

PMCID:: PMC2787425

Abstract Article PDF–2.4M

Select item 27874246.

Epistatic Effects of the Protease/Chaperone HflB on Some Damaged Forms of the Escherichia coli Ammonium Channel AmtB

William B. Inwood, Jason A. Hall, Kwang-Seo Kim, Lusine Demirkhanyan, David Wemmer, Helen Zgurskaya, Sydney Kustu

Genetics. 2009 Dec; 183(4): 1327–1340. doi: 10.1534/genetics.109.103747

PMCID:: PMC2787424

Abstract Article PDF–1.8M

Select item 26761097.

The Functional Role of Asp160 and the Deprotonation Mechanism of Ammonium in the Escherichia coli Ammonia Channel Protein AmtB

Yuchun Lin, Zexing Cao, Yirong Mo

J Phys Chem B. Author manuscript; available in PMC 2010 Apr 9.

Published in final edited form as: J Phys Chem B. 2009 Apr 9; 113(14): 4922–4929. doi: 10.1021/jp810651m

PMCID:: PMC2676109

Abstract Article PDF–2.7M

Select item 26640228.

Relative CO₂/NH₃ selectivities of AQP1, AQP4, AQP5, AmtB, and RhAG

Raif Musa-Aziz, Li-Ming Chen, Marc F. Pelletier, Walter F. Boron

Proc Natl Acad Sci U S A. 2009 Mar 31; 106(13): 5406–5411. Published online 2009 Mar 9. doi: 10.1073/pnas.0813231106

PMCID:: PMC2664022

Abstract Article PDF–579K

Select item 22781919.

Substrate binding, deprotonation, and selectivity at the periplasmic entrance of the Escherichia coli ammonia channel AmtB

Arnaud Javelle, Domenico Lupo, Pierre Ripoche, Tim Fulford, Mike Merrick, Fritz K. Winkler

Proc Natl Acad Sci U S A. 2008 Apr 1; 105(13): 5040–5045. Published online 2008 Mar 24. doi: 10.1073/pnas.0711742105

PMCID:: PMC2278191

Abstract Article PDF–761K

Select item 214184110.

The W148L substitution in the Escherichia coli ammonium channel AmtB increases flux and indicates that the substrate is an ion

Rebecca N. Fong, Kwang-Seo Kim, Corinne Yoshihara, William B. Inwood, Sydney Kustu

Proc Natl Acad Sci U S A. 2007 Nov 20; 104(47): 18706–18711. Published online 2007 Nov 12. doi: 10.1073/pnas.0709267104

PMCID:: PMC2141841

Abstract Article PDF–1016K

Select item 185235211.

A Stable Water Chain in the Hydrophobic Pore of the AmtB Ammonium Transporter

Guillaume Lamoureux, Michael L. Klein, Simon Bernèche

Biophys J. 2007 May 1; 92(9): L82–L84. Published online 2007 Mar 9. doi: 10.1529/biophysj.106.102756

PMCID:: PMC1852352

Abstract Article PDF–278K

Select item 179666112.

Deprotonation by Dehydration: The Origin of Ammonium Sensing in the AmtB Channel

David L Bostick, Charles L. Brooks III

PLoS Comput Biol. 2007 Feb; 3(2): e22. Prepublished online 2006 Dec 21. Published online 2007 Feb 9. doi: 10.1371/journal.pcbi.0030022

PMCID:: PMC1796661

Abstract Article PDF–2.0M

Select item 178311813.

The crystal structure of the Escherichia coli AmtB–GlnK complex reveals how GlnK regulates the ammonia channel

Matthew J. Conroy, Anne Durand, Domenico Lupo, Xiao-Dan Li, Per A. Bullough, Fritz K. Winkler, Mike Merrick

Proc Natl Acad Sci U S A. 2007 Jan 23; 104(4): 1213–1218. Published online 2007 Jan 12. doi: 10.1073/pnas.0610348104

PMCID:: PMC1783118

Abstract Article PDF–2.1M

Select item 177996614.

Detailed Mechanism for AmtB Conducting NH₄⁺/NH₃: Molecular Dynamics Simulations

Huaiyu Yang, Yechun Xu, Weiliang Zhu, Kaixian Chen, Hualiang Jiang

Biophys J. 2007 Feb 1; 92(3): 877–885. Published online 2006 Nov 10. doi: 10.1529/biophysj.106.090191

PMCID:: PMC1779966

Abstract Article PDF–1.4M

Select item 177992815.

Ammonium Recruitment and Ammonia Transport by E. coli Ammonia Channel AmtB

Thomas P. Nygaard, Carme Rovira, Günther H. Peters, Morten Ø. Jensen

Biophys J. 2006 Dec 15; 91(12): 4401–4412. Published online 2006 Sep 29. doi: 10.1529/biophysj.106.089714

PMCID:: PMC1779928

Abstract Article PDF–1.8M

Select item 176547316.

Inhibitory complex of the transmembrane ammonia channel, AmtB, and the cytosolic regulatory protein, GlnK, at 1.96 Å

Franz Gruswitz, Joseph O'Connell, III, Robert M. Stroud

Proc Natl Acad Sci U S A. 2007 Jan 2; 104(1): 42–47. Published online 2006 Dec 26. doi: 10.1073/pnas.0609796104

PMCID:: PMC1765473

Abstract Article PDF–3.8M

Select item 168148117.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 148295418.

Transposon Mutations in the 5′ End of glnD, the Gene for a Nitrogen Regulatory Sensor, That Suppress the Osmosensitive Phenotype Caused by otsBA Lesions in Escherichia coli

Anne Tøndervik, Haakon R. Torgersen, Hans K. Botnmark, Arne R. Strøm

J Bacteriol. 2006 Jun; 188(12): 4218–4226. doi: 10.1128/JB.00513-05

PMCID:: PMC1482954

Abstract Article PDF–161K

Select item 133438519.

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

Milton H. Saier, Jr, Can V. Tran, Ravi D. Barabote

Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D181–D186. Published online 2005 Dec 28. doi: 10.1093/nar/gkj001

PMCID:: PMC1334385

Abstract Article PDF–550K

Select item 132520020.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405