PMC Links for GEO Profiles (Select 35589621) - PMC

Select item 41238551.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 35674912.

Allosteric activation of exopolysaccharide synthesis through cyclic di-GMP-stimulated protein–protein interaction

Samuel Steiner, Christian Lori, Alex Boehm, Urs Jenal

EMBO J. 2013 Feb 6; 32(3): 354–368. Published online 2012 Nov 30. doi: 10.1038/emboj.2012.315

PMCID:: PMC3567491

Abstract Article PDF–836K

Select item 26726143.

Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins

Pingzhao Hu, Sarath Chandra Janga, Mohan Babu, J. Javier Díaz-Mejía, Gareth Butland, Wenhong Yang, Oxana Pogoutse, Xinghua Guo, Sadhna Phanse, Peter Wong, Shamanta Chandran, Constantine Christopoulos, Anaies Nazarians-Armavil, Negin Karimi Nasseri, Gabriel Musso, Mehrab Ali, Nazila Nazemof, Veronika Eroukova, Ashkan Golshani, Alberto Paccanaro, Jack F Greenblatt, Gabriel Moreno-Hagelsieb, Andrew Emili

PLoS Biol. 2009 Apr; 7(4): e1000096. Published online 2009 Apr 28. doi: 10.1371/journal.pbio.1000096

PMCID:: PMC2672614

Abstract Article

Select item 23949814.

Roles of pgaABCD Genes in Synthesis, Modification, and Export of the Escherichia coli Biofilm Adhesin Poly-β-1,6-N-Acetyl-d-Glucosamine

Yoshikane Itoh, John D. Rice, Carlos Goller, Archana Pannuri, Jeannette Taylor, Jeffrey Meisner, Terry J. Beveridge, James F. Preston, III, Tony Romeo

J Bacteriol. 2008 May; 190(10): 3670–3680. Published online 2008 Mar 21. doi: 10.1128/JB.01920-07

PMCID:: PMC2394981

Abstract Article PDF–1.0M

Select item 22066415.

Cell-free complements in vivo expression of the E. coli membrane proteome

David F. Savage, Corey L. Anderson, Yaneth Robles-Colmenares, Zachary E. Newby, Robert M. Stroud

Protein Sci. 2007 May; 16(5): 966–976. doi: 10.1110/ps.062696307

PMCID:: PMC2206641

Abstract Article PDF–289K

Select item 16981816.

The Cation-Responsive Protein NhaR of Escherichia coli Activates pgaABCD Transcription, Required for Production of the Biofilm Adhesin Poly-β-1,6-N-Acetyl-d-Glucosamine

Carlos Goller, Xin Wang, Yoshikane Itoh, Tony Romeo

J Bacteriol. 2006 Dec; 188(23): 8022–8032. Published online 2006 Sep 22. doi: 10.1128/JB.01106-06

PMCID:: PMC1698181

Abstract Article PDF–369K

Select item 16814817.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 13252008.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 13170069.

Spatial Periodicity of Escherichia coli K-12 Biofilm Microstructure Initiates during a Reversible, Polar Attachment Phase of Development and Requires the Polysaccharide Adhesin PGA

Konstantin Agladze, Xin Wang, Tony Romeo

J Bacteriol. 2005 Dec; 187(24): 8237–8246. doi: 10.1128/JB.187.24.8237-8246.2005

PMCID:: PMC1317006

Abstract Article PDF–603K

Select item 53883110.

Depolymerization of β-1,6-N-Acetyl-d-Glucosamine Disrupts the Integrity of Diverse Bacterial Biofilms

Yoshikane Itoh, Xin Wang, B. Joseph Hinnebusch, James F. Preston, III, Tony Romeo

J Bacteriol. 2005 Jan; 187(1): 382–387. doi: 10.1128/JB.187.1.382-387.2005

PMCID:: PMC538831

Abstract Article PDF–194K

Select item 38781911.

The pgaABCD Locus of Escherichia coli Promotes the Synthesis of a Polysaccharide Adhesin Required for Biofilm Formation

Xin Wang, James F. Preston, III, Tony Romeo

J Bacteriol. 2004 May; 186(9): 2724–2734. doi: 10.1128/JB.186.9.2724-2734.2004

PMCID:: PMC387819

Abstract Article PDF–656K

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