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Items: 1 to 20 of 21

1.
Minor Alterations in Core Promoter Element Positioning Reveal Functional Plasticity of a Bacterial Transcription Factor
Wamiah P. Chowdhury, Kenneth A. Satyshur, James L. Keck, Patricia J. Kiley
mBio. 2021 Nov-Dec; 12(6): e02753-21. Published online 2021 Nov 2. doi: 10.1128/mBio.02753-21
PMCID:
PMC8561392
AbstractArticlePDF–4.1M
2.
A Regulatory Circuit Composed of a Transcription Factor, IscR, and a Regulatory RNA, RyhB, Controls Fe-S Cluster Delivery
Pierre Mandin, Sylvia Chareyre, Frédéric Barras
mBio. 2016 Sep-Oct; 7(5): e00966-16. Published online 2016 Sep 20. doi: 10.1128/mBio.00966-16
PMCID:
PMC5040110
AbstractArticlePDF–879K
3.
Coordinate Regulation of the Suf and Isc Fe-S Cluster Biogenesis Pathways by IscR Is Essential for Viability of Escherichia coli
Erin L. Mettert, Patricia J. Kiley
J Bacteriol. 2014 Dec; 196(24): 4315–4323. doi: 10.1128/JB.01975-14
PMCID:
PMC4248859
AbstractArticlePDF–720K
4.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
5.
Regulation of iron-sulfur cluster homeostasis through transcriptional control of the Isc pathway by [2Fe-2S]-IscR in Escherichia coli
Jennifer L. Giel, April D. Nesbit, Erin L. Mettert, Angela S. Fleischhacker, Brendan T. Wanta, Patricia J. Kiley
Mol Microbiol. Author manuscript; available in PMC 2014 Jul 23.
Published in final edited form as: Mol Microbiol. 2013 Feb; 87(3): 478–492. Published online 2012 Oct 17. doi: 10.1111/mmi.12052
PMCID:
PMC4108476
AbstractArticlePDF–3.4M
6.
Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity
Senapathy Rajagopalan, Sarah J. Teter, Petrus H. Zwart, Richard G. Brennan, Kevin J. Phillips, Patricia J. Kiley
Nat Struct Mol Biol. Author manuscript; available in PMC 2013 Dec 1.
Published in final edited form as: Nat Struct Mol Biol. 2013 Jun; 20(6): 740–747. Published online 2013 May 5. doi: 10.1038/nsmb.2568
PMCID:
PMC3676455
AbstractArticlePDF–1.0M
7.
ArcA and AppY Antagonize IscR Repression of Hydrogenase-1 Expression under Anaerobic Conditions, Revealing a Novel Mode of O2 Regulation of Gene Expression in Escherichia coli
A. D. Nesbit, A. S. Fleischhacker, S. J. Teter, P. J. Kiley
J Bacteriol. 2012 Dec; 194(24): 6892–6899. doi: 10.1128/JB.01757-12
PMCID:
PMC3510566
AbstractArticlePDF–679K
8.
Sequence-specific binding to a subset of IscR regulated promoters does not require IscR Fe-S cluster ligation
A.D. Nesbit, J.L. Giel, J.C. Rose, P.J. Kiley
J Mol Biol. Author manuscript; available in PMC 2010 Mar 20.
Published in final edited form as: J Mol Biol. 2009 Mar 20; 387(1): 28–41. Published online 2009 Jan 31. doi: 10.1016/j.jmb.2009.01.055
PMCID:
PMC2709974
AbstractArticlePDF–1.6M
9.
Small RNA-induced differential degradation of the polycistronic mRNA iscRSUA
Guillaume Desnoyers, Audrey Morissette, Karine Prévost, Eric Massé
EMBO J. 2009 Jun 3; 28(11): 1551–1561. Published online 2009 Apr 30. doi: 10.1038/emboj.2009.116
PMCID:
PMC2693151
AbstractArticlePDF–1.0M
10.
IscR Controls Iron-Dependent Biofilm Formation in Escherichia coli by Regulating Type I Fimbria Expression
Yun Wu, F. Wayne Outten
J Bacteriol. 2009 Feb; 191(4): 1248–1257. Published online 2008 Dec 12. doi: 10.1128/JB.01086-08
PMCID:
PMC2631988
AbstractArticlePDF–969K
11.
Oxidant-Responsive Induction of the suf Operon, Encoding a Fe-S Assembly System, through Fur and IscR in Escherichia coli
Kyung-Chang Lee, Won-Sik Yeo, Jung-Hye Roe
J Bacteriol. 2008 Dec; 190(24): 8244–8247. Published online 2008 Oct 10. doi: 10.1128/JB.01161-08
PMCID:
PMC2593202
AbstractArticlePDF–491K
12.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
13.
Nitric Oxide in Chemostat-Cultured Escherichia coli Is Sensed by Fnr and Other Global Regulators: Unaltered Methionine Biosynthesis Indicates Lack of S Nitrosation
Steven T. Pullan, Mark D. Gidley, Richard A. Jones, Jason Barrett, Tania M. Stevanin, Robert C. Read, Jeffrey Green, Robert K. Poole
J Bacteriol. 2007 Mar; 189(5): 1845–1855. Published online 2006 Dec 22. doi: 10.1128/JB.01354-06
PMCID:
PMC1855760
AbstractArticlePDF–173K
14.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
15.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
16.
Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison
Lee Ann McCue, William Thompson, C. Steven Carmack, Charles E. Lawrence
Genome Res. 2002 Oct; 12(10): 1523–1532. doi: 10.1101/gr.323602
PMCID:
PMC187528
AbstractArticlePDF–192K
17.
Escherichia coli Endoribonucleases Involved in Cleavage of Bacteriophage T4 mRNAs
Yuichi Otsuka, Hiroyuki Ueno, Tetsuro Yonesaki
J Bacteriol. 2003 Feb; 185(3): 983–990. doi: 10.1128/JB.185.3.983-990.2003
PMCID:
PMC142818
AbstractArticlePDF–1.1M
18.
DNA Microarray-Mediated Transcriptional Profiling of the Escherichia coli Response to Hydrogen Peroxide
Ming Zheng, Xunde Wang, Lori J. Templeton, Dana R. Smulski, Robert A. LaRossa, Gisela Storz
J Bacteriol. 2001 Aug; 183(15): 4562–4570. doi: 10.1128/JB.183.15.4562-4570.2001
PMCID:
PMC95351
AbstractArticlePDF–509K
19.
IscR, an Fe-S cluster-containing transcription factor, represses expression of Escherichia coli genes encoding Fe-S cluster assembly proteins
Christopher J. Schwartz, Jennifer L. Giel, Thomas Patschkowski, Christopher Luther, Frank J. Ruzicka, Helmut Beinert, Patricia J. Kiley
Proc Natl Acad Sci U S A. 2001 Dec 18; 98(26): 14895–14900. Published online 2001 Dec 11. doi: 10.1073/pnas.251550898
PMCID:
PMC64955
AbstractArticlePDF–186K
20.
Feedback regulation of iron-sulfur cluster biosynthesis
Jeverson Frazzon, Dennis R. Dean
Proc Natl Acad Sci U S A. 2001 Dec 18; 98(26): 14751–14753. doi: 10.1073/pnas.011579098
PMCID:
PMC64927
ArticlePDF–132K

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