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Items: 1 to 20 of 25

1.
SbcC-SbcD and ExoI process convergent forks to complete chromosome replication
Brian M. Wendel, Jessica M. Cole, Charmain T. Courcelle, Justin Courcelle
Proc Natl Acad Sci U S A. 2018 Jan 9; 115(2): 349–354. Published online 2017 Dec 5. doi: 10.1073/pnas.1715960114
PMCID:
PMC5777064
AbstractArticlePDF–2.1M
2.
Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification
Fan Liu, Philip Lössl, Richard Scheltema, Rosa Viner, Albert J. R. Heck
Nat Commun. 2017; 8: 15473. Published online 2017 May 19. doi: 10.1038/ncomms15473
PMCID:
PMC5454533
AbstractArticlePDF–1.5M
3.
A novel mode of nuclease action is revealed by the bacterial Mre11/Rad50 complex
Chew Theng Lim, Pey Jiun Lai, David R. F. Leach, Hisaji Maki, Asako Furukohri
Nucleic Acids Res. 2015 Nov 16; 43(20): 9804–9816. Published online 2015 Aug 28. doi: 10.1093/nar/gkv855
PMCID:
PMC4787754
AbstractArticlePDF–7.7M
4.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
5.
The SMC-Like Protein Complex SbcCD Enhances DNA Polymerase IV-Dependent Spontaneous Mutation in Escherichia coli
Kimberly A. M. Storvik, Patricia L. Foster
J Bacteriol. 2011 Feb; 193(3): 660–669. Published online 2010 Dec 3. doi: 10.1128/JB.01166-10
PMCID:
PMC3021229
AbstractArticlePDF–819K
6.
RecA4142 Causes SOS Constitutive Expression by Loading onto Reversed Replication Forks in Escherichia coli K-12
Jarukit Edward Long, Shawn C. Massoni, Steven J. Sandler
J Bacteriol. 2010 May; 192(10): 2575–2582. Published online 2010 Mar 19. doi: 10.1128/JB.01623-09
PMCID:
PMC2863556
AbstractArticlePDF–1.1M
7.
Effects of Single-Strand DNases ExoI, RecJ, ExoVII, and SbcCD on Homologous Recombination of recBCD+ Strains of Escherichia coli and Roles of SbcB15 and XonA2 ExoI Mutant Enzymes
Brigitte Thoms, Inka Borchers, Wilfried Wackernagel
J Bacteriol. 2008 Jan; 190(1): 179–192. Published online 2007 Oct 26. doi: 10.1128/JB.01052-07
PMCID:
PMC2223745
AbstractArticlePDF–367K
8.
SbcCD Regulation and Localization in Escherichia coli
Elise Darmon, Manuel A. Lopez-Vernaza, Anne C. Helness, Amanda Borking, Emily Wilson, Zubin Thacker, Laura Wardrope, David R. F. Leach
J Bacteriol. 2007 Sep; 189(18): 6686–6694. Published online 2007 Jul 20. doi: 10.1128/JB.00489-07
PMCID:
PMC2045166
AbstractArticlePDF–293K
9.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
10.
Evidence for two mechanisms of palindrome-stimulated deletion in Escherichia coli: single-strand annealing and replication slipped mispairing.
M Bzymek, S T Lovett
Genetics. 2001 Jun; 158(2): 527–540. doi: 10.1093/genetics/158.2.527
PMCID:
PMC1461685
SummaryPDF–429K
11.
Palindromes as substrates for multiple pathways of recombination in Escherichia coli.
G A Cromie, C B Millar, K H Schmidt, D R Leach
Genetics. 2000 Feb; 154(2): 513–522. doi: 10.1093/genetics/154.2.513
PMCID:
PMC1460955
SummaryPDF–165K
12.
Large-scale identification of protein–protein interaction of Escherichia coli K-12
Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
PMCID:
PMC1457052
AbstractArticlePDF–536K
13.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
14.
Orientation Dependence in Homologous Recombination
K. Yamamoto, N. Takahashi, Y. Fujitani, H. Yoshikura, I. Kobayashi
Genetics. 1996 May; 143(1): 27–36. doi: 10.1093/genetics/143.1.27
PMCID:
PMC1207260
SummaryPDF–3.8M
15.
Biochemistry of homologous recombination in Escherichia coli.
S C Kowalczykowski, D A Dixon, A K Eggleston, S D Lauder, W M Rehrauer
Microbiol Rev. 1994 Sep; 58(3): 401–465. doi: 10.1128/mr.58.3.401-465.1994
PMCID:
PMC372975
SummaryPage BrowsePDF–16M
16.
Molecular organization of sbcC, a gene that affects genetic recombination and the viability of DNA palindromes in Escherichia coli K-12.
I S Naom, S J Morton, D R Leach, R G Lloyd
Nucleic Acids Res. 1989 Oct 25; 17(20): 8033–8045. doi: 10.1093/nar/17.20.8033
PMCID:
PMC334945
SummaryPage BrowsePDF–1.6M
17.
Identification and genetic analysis of sbcC mutations in commonly used recBC sbcB strains of Escherichia coli K-12.
R G Lloyd, C Buckman
J Bacteriol. 1985 Nov; 164(2): 836–844. doi: 10.1128/jb.164.2.836-844.1985
PMCID:
PMC214327
SummaryPage BrowsePDF–1.8M
18.
Mapping, sequence, and apparent lack of function of araJ, a gene of the Escherichia coli arabinose regulon.
T Reeder, R Schleif
J Bacteriol. 1991 Dec; 173(24): 7765–7771. doi: 10.1128/jb.173.24.7765-7771.1991
PMCID:
PMC212566
SummaryPage BrowsePDF–1.5M
19.
Methionine aminopeptidase gene of Escherichia coli is essential for cell growth.
S Y Chang, E C McGary, S Chang
J Bacteriol. 1989 Jul; 171(7): 4071–4072. doi: 10.1128/jb.171.7.4071-4072.1989
PMCID:
PMC210164
SummaryPage BrowsePDF–345K
20.
Linkage distortion following conjugational transfer of sbcC+ to recBC sbcBC strains of Escherichia coli.
R G Lloyd
J Bacteriol. 1991 Sep; 173(18): 5694–5698. doi: 10.1128/jb.173.18.5694-5698.1991
PMCID:
PMC208299
SummaryPage BrowsePDF–997K

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