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Items: 19

1.
Widespread bacterial lysine degradation proceeding via glutarate and L-2-hydroxyglutarate
Sebastian Knorr, Malte Sinn, Dmitry Galetskiy, Rhys M. Williams, Changhao Wang, Nicolai Müller, Olga Mayans, David Schleheck, Jörg S. Hartig
Nat Commun. 2018; 9: 5071. Published online 2018 Nov 29. doi: 10.1038/s41467-018-07563-6
PMCID:
PMC6265302
ArticlePDF–779K
2.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
ArticlePDF–1.1M
3.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
ArticlePDF–1.0M
4.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
ArticlePDF–141K
5.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
ArticlePDF–204K
6.
Activation of the gab Operon in an RpoS-Dependent Manner by Mutations That Truncate the Inner Core of Lipopolysaccharide in Escherichia coli
Moses L. Joloba, Katy M. Clemmer, Darren D. Sledjeski, Philip N. Rather
J Bacteriol. 2004 Dec; 186(24): 8542–8546. doi: 10.1128/JB.186.24.8542-8546.2004
PMCID:
PMC532415
ArticlePDF–124K
7.
Genetic Analysis of the γ-Aminobutyrate Utilization Pathway in Escherichia coli K-12
Shabtay Dover, Yeheskel S. Halpern
J Bacteriol. 1974 Feb; 117(2): 494–501. doi: 10.1128/jb.117.2.494-501.1974
PMCID:
PMC285539
ArticlePDF–1.1M
8.
Utilization of γ-Aminobutyric Acid as the Sole Carbon and Nitrogen Source by Escherichia coli K-12 Mutants
Shabtay Dover, Yeheskel S. Halpern
J Bacteriol. 1972 Feb; 109(2): 835–843. doi: 10.1128/jb.109.2.835-843.1972
PMCID:
PMC285213
ArticlePDF–1.2M
9.
Control of the Pathway of γ-Aminobutyrate Breakdown in Escherichia coli K-12
Shabtay Dover, Yeheskel S. Halpern
J Bacteriol. 1972 Apr; 110(1): 165–170. doi: 10.1128/jb.110.1.165-170.1972
PMCID:
PMC247394
ArticlePDF–724K
10.
Regulation of gamma-aminobutyric acid degradation in Escherichia coli by nitrogen metabolism enzymes.
M Zaboura, Y S Halpern
J Bacteriol. 1978 Feb; 133(2): 447–451. doi: 10.1128/jb.133.2.447-451.1978
PMCID:
PMC222043
ArticlePDF–737K
11.
Isolation and properties of Escherichia coli K-12 mutants impaired in the utilization of gamma-aminobutyrate.
E Metzer, R Levitz, Y S Halpern
J Bacteriol. 1979 Mar; 137(3): 1111–1118. doi: 10.1128/jb.137.3.1111-1118.1979
PMCID:
PMC218289
ArticlePDF–1.1M
12.
Molecular analysis of two genes of the Escherichia coli gab cluster: nucleotide sequence of the glutamate:succinic semialdehyde transaminase gene (gabT) and characterization of the succinic semialdehyde dehydrogenase gene (gabD).
K Bartsch, A von Johnn-Marteville, A Schulz
J Bacteriol. 1990 Dec; 172(12): 7035–7042. doi: 10.1128/jb.172.12.7035-7042.1990
PMCID:
PMC210825
ArticlePDF–1.4M
13.
In vivo cloning and characterization of the gabCTDP gene cluster of Escherichia coli K-12.
E Metzer, Y S Halpern
J Bacteriol. 1990 Jun; 172(6): 3250–3256. doi: 10.1128/jb.172.6.3250-3256.1990
PMCID:
PMC209132
ArticlePDF–1.2M
14.
Stereospecific production of the herbicide phosphinothricin (glufosinate) by transamination: cloning, characterization, and overexpression of the gene encoding a phosphinothricin-specific transaminase from Escherichia coli.
K Bartsch, R Dichmann, P Schmitt, E Uhlmann, A Schulz
Appl Environ Microbiol. 1990 Jan; 56(1): 7–12. doi: 10.1128/aem.56.1.7-12.1990
PMCID:
PMC183242
ArticlePDF–1.1M
15.
Stereospecific production of the herbicide phosphinothricin (glufosinate) by transamination: isolation and characterization of a phosphinothricin-specific transaminase from Escherichia coli.
A Schulz, P Taggeselle, D Tripier, K Bartsch
Appl Environ Microbiol. 1990 Jan; 56(1): 1–6. doi: 10.1128/aem.56.1.1-6.1990
PMCID:
PMC183241
ArticlePDF–1.2M
16.
The Escherichia coli gabDTPC Operon: Specific γ-Aminobutyrate Catabolism and Nonspecific Induction
Barbara L. Schneider, Stephen Ruback, Alexandros K. Kiupakis, Hillary Kasbarian, Christine Pybus, Larry Reitzer
J Bacteriol. 2002 Dec; 184(24): 6976–6986. doi: 10.1128/JB.184.24.6976-6986.2002
PMCID:
PMC135471
ArticlePDF–488K
17.
pH-Dependent Expression of Periplasmic Proteins and Amino Acid Catabolism in Escherichia coli
Lauren M. Stancik, Dawn M. Stancik, Brian Schmidt, D. Michael Barnhart, Yuliya N. Yoncheva, Joan L. Slonczewski
J Bacteriol. 2002 Aug; 184(15): 4246–4258. doi: 10.1128/JB.184.15.4246-4258.2002
PMCID:
PMC135203
ArticlePDF–2.4M
18.
Indole Can Act as an Extracellular Signal in Escherichia coli
Dandan Wang, Xuedong Ding, Philip N. Rather
J Bacteriol. 2001 Jul; 183(14): 4210–4216. doi: 10.1128/JB.183.14.4210-4216.2001
PMCID:
PMC95310
ArticlePDF–109K
19.
Escherichia coli genes regulated by cell-to-cell signaling
Rita R. Baca-DeLancey, Mary M. T. South, Xuedong Ding, Philip N. Rather
Proc Natl Acad Sci U S A. 1999 Apr 13; 96(8): 4610–4614. doi: 10.1073/pnas.96.8.4610
PMCID:
PMC16380
ArticlePDF–95K

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