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Select item 105455011.

High-level ceftazidime/avibactam resistance in Escherichia coli conferred by the novel plasmid-mediated β-lactamase CMY-185 variant

William C Shropshire, Bradley T Endres, Jovan Borjan, Samuel L Aitken, William C Bachman, Christi L McElheny, Chin-Ting Wu, Stephanie L Egge, Ayesha Khan, William R Miller, Micah M Bhatti, Pranoti Saharasbhojane, Akito Kawai, Ryan K Shields, Samuel A Shelburne, Yohei Doi

J Antimicrob Chemother. 2023 Oct; 78(10): 2442–2450. Published online 2023 Aug 14. doi: 10.1093/jac/dkad249

PMCID:: PMC10545501

Abstract Article PDF–6.5M

Select item 82612452.

Clonal Relationship and Resistance Profiles Among ESBL-Producing Escherichia coli

Alireza Dolatyar Dehkharghani, Setareh Haghighat, Marjan Rahnamaye Farzami, Mohammad Rahbar, Masoumeh Douraghi

Front Cell Infect Microbiol. 2021; 11: 560622. Published online 2021 Jun 23. doi: 10.3389/fcimb.2021.560622

PMCID:: PMC8261245

Abstract Article PDF–2.0M

Select item 72190333.

Surveillance of OXA-244-producing Escherichia coli and epidemiologic investigation of cases, Denmark, January 2016 to August 2019

Anette M Hammerum, Lone Jannok Porsbo, Frank Hansen, Louise Roer, Hülya Kaya, Anna Henius, Karina Lauenborg Møller, Ulrik S Justesen, Lillian Søes, Bent L Røder, Philip K Thomsen, Mikala Wang, Turid Snekloth Søndergaard, Barbara Juliane Holzknecht, Claus Østergaard, Anne Kjerulf, Brian Kristensen, Henrik Hasman

Euro Surveill. 2020 May 7; 25(18): 1900742. doi: 10.2807/1560-7917.ES.2020.25.18.1900742

PMCID:: PMC7219033

Abstract Article PDF–430K

Select item 66320264.

ESBL and AmpC β-Lactamases in Clinical Strains of Escherichia coli from Serra da Estrela, Portugal

Cátia Oliveira, Paula Amador, Cristina Prudêncio, Cândida T Tomaz, Paulo Tavares-Ratado, Rúben Fernandes

Medicina (Kaunas) 2019 Jun; 55(6): 272. Published online 2019 Jun 12. doi: 10.3390/medicina55060272

PMCID:: PMC6632026

Abstract Article PDF–1.0M

Select item 47735465.

Dissemination of Extended-Spectrum β-Lactamase- and AmpC β-Lactamase-Producing Escherichia coli within the Food Distribution System of Ho Chi Minh City, Vietnam

Do Phuc Nguyen, Thi Anh Dao Nguyen, Thi Hien Le, Nguyen Minh Doan Tran, Thanh Phong Ngo, Van Chinh Dang, Takao Kawai, Masashi Kanki, Ryuji Kawahara, Michio Jinnai, Shinya Yonogi, Yuji Hirai, Yoshimasa Yamamoto, Yuko Kumeda

Biomed Res Int. 2016; 2016: 8182096. Published online 2016 Feb 17. doi: 10.1155/2016/8182096

PMCID:: PMC4773546

Abstract Article PDF–985K

Select item 28151016.

Structural Bases for Stability-Function Tradeoffs in Antibiotic Resistance

Veena L. Thomas, Andrea C. McReynolds, Brian K. Shoichet

J Mol Biol. Author manuscript; available in PMC 2011 Feb 12.

Published in final edited form as: J Mol Biol. 2010 Feb 12; 396(1): 47. Published online 2009 Nov 10. doi: 10.1016/j.jmb.2009.11.005

PMCID:: PMC2815101

Abstract Article PDF–2.1M

Select item 27603727.

Re-examining the role of Lys67 in class C β-lactamase catalysis

Yu Chen, Andrea McReynolds, Brian K Shoichet

Protein Sci. 2009 Mar; 18(3): 662–669. Published online 2009 Jan 11. doi: 10.1002/pro.60

PMCID:: PMC2760372

Abstract Article PDF–744K

Select item 26719838.

Docking for fragment inhibitors of AmpC β-lactamase

Denise G. Teotico, Kerim Babaoglu, Gabriel J. Rocklin, Rafaela S. Ferreira, Anthony M. Giannetti, Brian K. Shoichet

Proc Natl Acad Sci U S A. 2009 May 5; 106(18): 7455–7460. Published online 2009 Apr 22. doi: 10.1073/pnas.0813029106

PMCID:: PMC2671983

Abstract Article PDF–1.1M

Select item 26553129.

Comprehensive Mechanistic Analysis of Hits from High-Throughput and Docking Screens against β-Lactamase

Kerim Babaoglu, Anton Simeonov, John J. Irwin, Michael E. Nelson, Brian Feng, Craig J. Thomas, Laura Cancian, M. Paola Costi, David A. Maltby, Ajit Jadhav, James Inglese, Christopher P. Austin, Brian K. Shoichet

J Med Chem. Author manuscript; available in PMC 2009 Apr 24.

Published in final edited form as: J Med Chem. 2008 Apr 24; 51(8): 2502–2511. Published online 2008 Mar 12. doi: 10.1021/jm701500e

PMCID:: PMC2655312

Abstract Article PDF–1.4M

Select item 262063710.

AmpC β-Lactamases

George A. Jacoby

Clin Microbiol Rev. 2009 Jan; 22(1): 161–182. doi: 10.1128/CMR.00036-08

PMCID:: PMC2620637

Abstract Article PDF–761K

Select item 232395211.

Prediction of lipoprotein signal peptides in Gram-negative bacteria

Agnieszka S. Juncker, Hanni Willenbrock, Gunnar von Heijne, Søren Brunak, Henrik Nielsen, Anders Krogh

Protein Sci. 2003 Aug; 12(8): 1652–1662. doi: 10.1110/ps.0303703

PMCID:: PMC2323952

Abstract Article PDF–330K

Select item 214420912.

The complexed structure and antimicrobial activity of a non-beta-lactam inhibitor of AmpC beta-lactamase.

R. A. Powers, J. Blázquez, G. S. Weston, M. I. Morosini, F. Baquero, B. K. Shoichet

Protein Sci. 1999 Nov; 8(11): 2330–2337. doi: 10.1110/ps.8.11.2330

PMCID:: PMC2144209

Summary PDF–1.2M

Select item 168148113.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 145705214.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 134745215.

MEROPS: the peptidase database

Neil D. Rawlings, Fraser R. Morton, Alan J. Barrett

Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D270–D272. Published online 2005 Dec 28. doi: 10.1093/nar/gkj089

PMCID:: PMC1347452

Abstract Article PDF–55K

Select item 132520016.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405