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Items: 1 to 20 of 116

1.
Transition-state stabilization in Escherichia coli ribonuclease P RNA-mediated cleavage of model substrates
Shiying Wu, Yu Chen, Guanzhong Mao, Stefan Trobro, Marek Kwiatkowski, Leif A. Kirsebom
Nucleic Acids Res. 2014 Jan 1; 42(1): 631–642. Published online 2013 Oct 3. doi: 10.1093/nar/gkt853
PMCID:
PMC3874170
AbstractArticlePDF–3.3M
2.
Binding of C5 Protein to P RNA Enhances the Rate Constant for Catalysis for P RNA Processing of Pre-tRNAs Lacking a Consensus G(+1)/C(+72) Pair
Lei Sun, Frank E. Campbell, Lindsay E. Yandek, Michael E. Harris
J Mol Biol. Author manuscript; available in PMC 2012 Aug 2.
Published in final edited form as: J Mol Biol. 2010 Feb 5; 395(5): 1019–1037. Published online 2009 Nov 13. doi: 10.1016/j.jmb.2009.11.027
PMCID:
PMC3410724
AbstractArticlePDF–1016K
3.
Protein-Precursor tRNA Contact Leads to Sequence-Specific Recognition of 5’ Leaders by Bacterial Ribonuclease P
Kristin S. Koutmou, Nathan H. Zahler, Jeffrey C. Kurz, Frank E. Campbell, Michael E. Harris, Carol A. Fierke
J Mol Biol. Author manuscript; available in PMC 2011 Feb 12.
Published in final edited form as: J Mol Biol. 2010 Feb 12; 396(1): 195–208. Published online 2009 Nov 28. doi: 10.1016/j.jmb.2009.11.039
PMCID:
PMC2829246
AbstractArticlePDF–1.9M
4.
Processing of the Escherichia coli leuX tRNA transcript, encoding tRNALeu5, requires either the 3′→5′ exoribonuclease polynucleotide phosphorylase or RNase P to remove the Rho-independent transcription terminator
Bijoy K. Mohanty, Sidney R. Kushner
Nucleic Acids Res. 2010 Jan; 38(2): 597–607. Published online 2009 Nov 11. doi: 10.1093/nar/gkp997
PMCID:
PMC2811032
AbstractArticlePDF–1.7M
5.
Investigation of catalysis by bacterial RNase P via LNA and other modifications at the scissile phosphodiester
Simona Cuzic-Feltens, Michael H. W. Weber, Roland K. Hartmann
Nucleic Acids Res. 2009 Dec; 37(22): 7638–7653. Published online 2009 Sep 30. doi: 10.1093/nar/gkp775
PMCID:
PMC2794163
AbstractArticlePDF–1.9M
6.
In Vivo Display of a Multisubunit Enzyme Complex on Biogenic Magnetic Nanoparticles
Shoji Ohuchi, Dirk Schüler
Appl Environ Microbiol. 2009 Dec; 75(24): 7734–7738. Published online 2009 Oct 16. doi: 10.1128/AEM.01640-09
PMCID:
PMC2794094
AbstractArticlePDF–879K
7.
The Crystal Structure of the Escherichia coli RNase E Apoprotein and a Mechanism for RNA Degradation
Daniel J. Koslover, Anastasia J. Callaghan, Maria J. Marcaida, Elspeth F. Garman, Monika Martick, William G. Scott, Ben F. Luisi
Structure. 2008 Aug 6; 16(8-2): 1238–1244. doi: 10.1016/j.str.2008.04.017
PMCID:
PMC2631609
AbstractArticle
8.
Rho-independent transcription terminators inhibit RNase P processing of the secG leuU and metT tRNA polycistronic transcripts in Escherichia coli
Bijoy K. Mohanty, Sidney R. Kushner
Nucleic Acids Res. 2008 Feb; 36(2): 364–375. Published online 2007 Nov 22. doi: 10.1093/nar/gkm991
PMCID:
PMC2241853
AbstractArticlePDF–399K
9.
Ribonuclease P processes polycistronic tRNA transcripts in Escherichia coli independent of ribonuclease E
Bijoy K. Mohanty, Sidney R. Kushner
Nucleic Acids Res. 2007 Dec; 35(22): 7614–7625. Published online 2007 Nov 2. doi: 10.1093/nar/gkm917
PMCID:
PMC2190699
AbstractArticlePDF–383K
10.
Structural basis of a ribozyme's thermostability: P1–L9 interdomain interaction in RNase P RNA
Michal Marszalkowski, Dagmar K. Willkomm, Roland K. Hartmann
RNA. 2008 Jan; 14(1): 127–133. doi: 10.1261/rna.762508
PMCID:
PMC2151030
AbstractArticlePDF–482K
11.
Folding of noncoding RNAs during transcription facilitated by pausing-induced nonnative structures
Terrence N. Wong, Tobin R. Sosnick, Tao Pan
Proc Natl Acad Sci U S A. 2007 Nov 13; 104(46): 17995–18000. Published online 2007 Nov 6. doi: 10.1073/pnas.0705038104
PMCID:
PMC2084285
AbstractArticlePDF–637K
12.
Evidence that binding of C5 protein to P RNA enhances ribozyme catalysis by influencing active site metal ion affinity
Lei Sun, Michael E. Harris
RNA. 2007 Sep; 13(9): 1505–1515. doi: 10.1261/rna.571007
PMCID:
PMC1950769
AbstractArticlePDF–592K
13.
The precursor tRNA 3′-CCA interaction with Escherichia coli RNase P RNA is essential for catalysis by RNase P in vivo
Barbara Wegscheid, Roland K. Hartmann
RNA. 2006 Dec; 12(12): 2135–2148. doi: 10.1261/rna.188306
PMCID:
PMC1664727
AbstractArticlePDF–600K
14.
Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris
EMBO J. 2006 Sep 6; 25(17): 3998–4007. Published online 2006 Aug 24. doi: 10.1038/sj.emboj.7601290
PMCID:
PMC1560353
AbstractArticlePDF–405K
15.
Hybrid E. coli—Mitochondrial ribonuclease P RNAs are catalytically active
Elias Seif, Alexandre Cadieux, B. Franz Lang
RNA. 2006 Sep; 12(9): 1661–1670. doi: 10.1261/rna.52106
PMCID:
PMC1557692
AbstractArticlePDF–635K
16.
Structural basis for altering the stability of homologous RNAs from a mesophilic and a thermophilic bacterium
NATHAN J. BAIRD, NARAYANAN SRIVIDYA, ANDREY S. KRASILNIKOV, ALFONSO MONDRAGÓN, TOBIN R. SOSNICK, TAO PAN
RNA. 2006 Apr; 12(4): 598–606. doi: 10.1261/rna.2186506
PMCID:
PMC1421087
AbstractArticlePDF–803K
17.
Lead(II) cleavage analysis of RNase P RNA in vivo
MAGNUS LINDELL, MATHIAS BRÄNNVALL, E. GERHART H. WAGNER, LEIF A. KIRSEBOM
RNA. 2005 Sep; 11(9): 1348–1354. doi: 10.1261/rna.2590605
PMCID:
PMC1370818
AbstractArticlePDF–479K
18.
Inhibition of Escherichia coli RNase P by oligonucleotide directed misfolding of RNA
JESSICA L. CHILDS, ALEX W. POOLE, DOUGLAS H. TURNER
RNA. 2003 Dec; 9(12): 1437–1445. doi: 10.1261/rna.5780503
PMCID:
PMC1370498
AbstractArticlePDF–286K
19.
Recognition of the 5′ leader of pre-tRNA substrates by the active site of ribonuclease P
NATHAN H. ZAHLER, ERIC L. CHRISTIAN, MICHAEL E. HARRIS
RNA. 2003 Jun; 9(6): 734–745. doi: 10.1261/rna.5220703
PMCID:
PMC1370440
AbstractArticlePDF–494K
20.
RNase E plays an essential role in the maturation of Escherichia coli tRNA precursors.
Zhongwei Li, Murray P Deutscher
RNA. 2002 Jan; 8(1): 97–109. doi: 10.1017/s1355838202014929
PMCID:
PMC1370232
SummaryPDF–589K

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