PMC Links for GEO Profiles (Select 35612242) - PMC

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 36648294.

The Yin and Yang of tRNA: proper binding of acceptor end determines the catalytic balance of editing and aminoacylation

Min Tan, Meng Wang, Xiao-Long Zhou, Wei Yan, Gilbert Eriani, En-Duo Wang

Nucleic Acids Res. 2013 May; 41(10): 5513–5523. Published online 2013 Apr 12. doi: 10.1093/nar/gkt252

PMCID:: PMC3664829

Abstract Article PDF–4.6M

Select item 32853555.

YajL, Prokaryotic Homolog of Parkinsonism-associated Protein DJ-1, Functions as a Covalent Chaperone for Thiol Proteome

Hai-Tuong Le, Valérie Gautier, Fatoum Kthiri, Abderrahim Malki, Nadia Messaoudi, Mouadh Mihoub, Ahmed Landoulsi, Young Jun An, Sun-Shin Cha, Gilbert Richarme

J Biol Chem. 2012 Feb 17; 287(8): 5861–5870. Published online 2011 Dec 7. doi: 10.1074/jbc.M111.299198

PMCID:: PMC3285355

Abstract Article PDF–1.2M

Select item 29053816.

Functional Segregation of a Predicted “Hinge” Site within the β-Strand Linkers of Escherichia coli Leucyl-tRNA Synthetase

Anjali P. Mascarenhas, Susan A. Martinis

Biochemistry. Author manuscript; available in PMC 2010 Jul 16.

Published in final edited form as: Biochemistry. 2008 Apr 22; 47(16): 4808–4816. Published online 2008 Mar 26. doi: 10.1021/bi702494q

PMCID:: PMC2905381

Abstract Article PDF–1.8M

Select item 28234337.

tRNA-dependent Pre-transfer Editing by Prokaryotic Leucyl-tRNA Synthetase

Min Tan, Bin Zhu, Xiao-Long Zhou, Ran He, Xin Chen, Gilbert Eriani, En-Duo Wang

J Biol Chem. 2010 Jan 29; 285(5): 3235–3244. Published online 2009 Nov 23. doi: 10.1074/jbc.M109.060616

PMCID:: PMC2823433

Abstract Article PDF–2.6M

Select item 28078218.

A Glycine Hinge for tRNA-dependent Translocation of Editing Substrates to Prevent Errors by Leucyl-tRNA Synthetase

Anjali P. Mascarenhas, Susan A. Martini

FEBS Lett. Author manuscript; available in PMC 2010 Nov 3.

Published in final edited form as: FEBS Lett. 2009 Nov 3; 583(21): 3443–3447. Published online 2009 Sep 29. doi: 10.1016/j.febslet.2009.09.039

PMCID:: PMC2807821

Abstract Article PDF–782K

Select item 26701539.

Defects in Transient tRNA Translocation Bypass tRNA Synthetase Quality Control Mechanisms

Rachel A. Hellmann, Susan A. Martinis

J Biol Chem. 2009 Apr 24; 284(17): 11478–11484. doi: 10.1074/jbc.M807395200

PMCID:: PMC2670153

Abstract Article PDF–607K

Select item 266231210.

The CP2 Domain of Leucyl-tRNA Synthetase Is Crucial for Amino Acid Activation and Post-transfer Editing

Xiao-Long Zhou, Bin Zhu, En-Duo Wang

J Biol Chem. 2008 Dec 26; 283(52): 36608–36616. doi: 10.1074/jbc.M806745200

PMCID:: PMC2662312

Abstract Article PDF–602K

Select item 261474311.

CP1-dependent partitioning of pretransfer and posttransfer editing in leucyl-tRNA synthetase

Michal T. Boniecki, Michael T. Vu, Aswini K. Betha, Susan A. Martinis

Proc Natl Acad Sci U S A. 2008 Dec 9; 105(49): 19223–19228. Published online 2008 Nov 19. doi: 10.1073/pnas.0809336105

PMCID:: PMC2614743

Abstract Article PDF–865K

Select item 251891412.

Isolated CP1 Domain of Escherichia coli Leucyl-tRNA Synthetase is Dependent on Flanking Hinge Motifs for Amino Acid Editing Activity

Aswini K. Betha, Amy M. Williams, Susan A. Martinis

Biochemistry. Author manuscript; available in PMC 2008 Aug 21.

Published in final edited form as: Biochemistry. 2007 May 29; 46(21): 6258–6267. Published online 2007 May 3. doi: 10.1021/bi061965j

PMCID:: PMC2518914

Abstract Article PDF–2.5M

Select item 251891213.

A Unique Insert of Leucyl-tRNA Synthetase is Required for Aminoacylation and Not Amino Acid Editing

Michael T. Vu, Susan A. Martinis

Biochemistry. Author manuscript; available in PMC 2008 Aug 21.

Published in final edited form as: Biochemistry. 2007 May 1; 46(17): 5170–5176. Published online 2007 Apr 4. doi: 10.1021/bi062078j

PMCID:: PMC2518912

Abstract Article PDF–2.4M

Select item 251806214.

A single residue in LeuRS affecting amino acid specificity and tRNA aminoacylation

Stanley W. Lue, Shana O. Kelley

Biochemistry. Author manuscript; available in PMC 2008 Aug 19.

Published in final edited form as: Biochemistry. 2007 Apr 17; 46(15): 4466–4472. Published online 2007 Mar 23. doi: 10.1021/bi0618215

PMCID:: PMC2518062

Abstract Article PDF–1.1M

Select item 229217715.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 227079316.

A Flexible Peptide Tether Controls Accessibility of a Unique C-terminal RNA Binding Domain in Leucyl-tRNA Synthetases

Jennifer L. Hsu, Susan A. Martinis

J Mol Biol. Author manuscript; available in PMC 2009 Feb 15.

Published in final edited form as: J Mol Biol. 2008 Feb 15; 376(2): 482–491. Published online 2007 Nov 28. doi: 10.1016/j.jmb.2007.11.065

PMCID:: PMC2270793

Abstract Article PDF–999K

Select item 216893817.

Amino Acid Toxicities of Escherichia coli That Are Prevented by Leucyl-tRNA Synthetase Amino Acid Editing

Vrajesh A. Karkhanis, Anjali P. Mascarenhas, Susan A. Martinis

J Bacteriol. 2007 Dec; 189(23): 8765–8768. Published online 2007 Sep 21. doi: 10.1128/JB.01215-07

PMCID:: PMC2168938

Abstract Article PDF–262K

Select item 168148218.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori

Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050

PMCID:: PMC1681482

Abstract Article PDF–400K

Select item 168148119.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049