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Items: 1 to 20 of 28

1.
DSBSO-Based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples
Fenglong Jiao, Clinton Yu, Andrew Wheat, Lijun Chen, Tung-Shing Mamie Lih, Hui Zhang, Lan Huang
J Proteome Res. Author manuscript; available in PMC 2024 Aug 3.
Published in final edited form as: J Proteome Res. 2024 Aug 2; 23(8): 3269–3279. Published online 2024 Feb 9. doi: 10.1021/acs.jproteome.3c00832
PMCID:
PMC11296914
AbstractArticlePDF–1.7M
2.
HIVEP3 cooperates with ferroptosis gene signatures to confer adverse prognosis in acute myeloid leukemia
Xiaoning Zhang, Xiaoyu Zhang, Kuo Liu, Wenwen Li, Jiazheng Wang, Peng Liu, Wanshan Ma
Cancer Med. 2022 Dec; 11(24): 5050–5065. Published online 2022 May 10. doi: 10.1002/cam4.4806
PMCID:
PMC9761064
AbstractArticlePDF–17M
3.
A dual-activity topoisomerase complex regulates mRNA translation and turnover
Shuaikun Su, Yutong Xue, Alexei Sharov, Yongqing Zhang, Seung Kyu Lee, Jennifer L Martindale, Wen Li, Wai Lim Ku, Keji Zhao, Supriyo De, Weiping Shen, Payel Sen, Myriam Gorospe, Dongyi Xu, Weidong Wang
Nucleic Acids Res. 2022 Jul 8; 50(12): 7013–7033. Published online 2022 Jun 24. doi: 10.1093/nar/gkac538
PMCID:
PMC9262614
AbstractArticlePDF–3.6M
4.
Protein interaction landscapes revealed by advanced in vivo cross-linking–mass spectrometry
Andrew Wheat, Clinton Yu, Xiaorong Wang, Anthony M. Burke, Ilan E. Chemmama, Robyn M. Kaake, Peter Baker, Scott D. Rychnovsky, Jing Yang, Lan Huang
Proc Natl Acad Sci U S A. 2021 Aug 10; 118(32): e2023360118. Published online 2021 Aug 4. doi: 10.1073/pnas.2023360118
PMCID:
PMC8364181
AbstractArticlePDF–3.0M
5.
The identification and structural analysis of potential 14-3-3 interaction sites on the bone regulator protein Schnurri-3
Lorenzo Soini, Seppe Leysen, Tom Crabbe, Jeremy Davis, Christian Ottmann
Acta Crystallogr F Struct Biol Commun. 2021 Aug 1; 77(Pt 8): 254–261. Published online 2021 Jul 28. doi: 10.1107/S2053230X21006658
PMCID:
PMC8329713
AbstractArticlePDF–1.4M
6.
Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis
Katrin Tiemann, Carolina Garri, Sang Bok Lee, Paymaneh D. Malihi, Mincheol Park, Ruth M. Alvarez, Li Peng Yap, Parag Mallick, Jonathan E. Katz, Mitchell E. Gross, Kian Kani
Oncogene. Author manuscript; available in PMC 2020 Sep 29.
Published in final edited form as: Oncogene. 2019 Apr; 38(16): 3003–3018. Published online 2018 Dec 21. doi: 10.1038/s41388-018-0638-9
PMCID:
PMC7523706
AbstractArticlePDF–2.3M
7.
NudCL2 regulates cell migration by stabilizing both myosin-9 and LIS1 with Hsp90
Wenwen Chen, Wei Wang, Xiaoxia Sun, Shanshan Xie, Xiaoyang Xu, Min Liu, Chunxia Yang, Min Li, Wen Zhang, Wei Liu, Liangjing Wang, Tianhua Zhou, Yuehong Yang
Cell Death Dis. 2020 Jul; 11(7): 534. Published online 2020 Jul 14. doi: 10.1038/s41419-020-02739-9
Correction in:
Cell Death Dis. 2024 Dec; 15(12): 886.
PMCID:
PMC7360774
AbstractArticlePDF–3.3M
8.
VIRMA mediates preferential m6A mRNA methylation in 3′UTR and near stop codon and associates with alternative polyadenylation
Yanan Yue, Jun Liu, Xiaolong Cui, Jie Cao, Guanzheng Luo, Zezhou Zhang, Tao Cheng, Minsong Gao, Xiao Shu, Honghui Ma, Fengqin Wang, Xinxia Wang, Bin Shen, Yizhen Wang, Xinhua Feng, Chuan He, Jianzhao Liu
Cell Discov. 2018; 4: 10. Published online 2018 Feb 27. doi: 10.1038/s41421-018-0019-0
PMCID:
PMC5826926
AbstractArticlePDF–2.3M
9.
RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination
Nila Roy Choudhury, Gregory Heikel, Maryia Trubitsyna, Peter Kubik, Jakub Stanislaw Nowak, Shaun Webb, Sander Granneman, Christos Spanos, Juri Rappsilber, Alfredo Castello, Gracjan Michlewski
BMC Biol. 2017; 15: 105. Published online 2017 Nov 8. doi: 10.1186/s12915-017-0444-9
PMCID:
PMC5678581
AbstractArticlePDF–3.2M
10.
Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing
Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown
Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114
PMCID:
PMC5495225
AbstractArticlePDF–1.3M
11.
De novo genic mutations among a Chinese autism spectrum disorder cohort
Tianyun Wang, Hui Guo, Bo Xiong, Holly A.F. Stessman, Huidan Wu, Bradley P. Coe, Tychele N. Turner, Yanling Liu, Wenjing Zhao, Kendra Hoekzema, Laura Vives, Lu Xia, Meina Tang, Jianjun Ou, Biyuan Chen, Yidong Shen, Guanglei Xun, Min Long, Janice Lin, Zev N. Kronenberg, Yu Peng, Ting Bai, Honghui Li, Xiaoyan Ke, Zhengmao Hu, Jingping Zhao, Xiaobing Zou, Kun Xia, Evan E. Eichler
Nat Commun. 2016; 7: 13316. Published online 2016 Nov 8. doi: 10.1038/ncomms13316
PMCID:
PMC5105161
AbstractArticlePDF–584K
12.
Genes with de novo mutations are shared by four neuropsychiatric disorders discovered from NPdenovo database
Jinchen Li, Tao Cai, Yi Jiang, Huiqian Chen, Xin He, Chao Chen, Xianfeng Li, Qianzhi Shao, Xia Ran, Zhongshan Li, Kun Xia, Chunyu Liu, Zhong Sheng Sun, Jinyu Wu
Mol Psychiatry. Author manuscript; available in PMC 2016 Apr 20.
Published in final edited form as: Mol Psychiatry. 2016 Feb; 21(2): 290–297. Published online 2015 Apr 7. doi: 10.1038/mp.2015.40
Correction in:
Mol Psychiatry. 2016 Feb; 21(2): 298.
PMCID:
PMC4837654
AbstractArticlePDF–1.4M
13.
Effect of Lyso-phosphatidylcholine and Schnurri-3 on Osteogenic Transdifferentiation of Vascular Smooth Muscle Cells to Calcifying Vascular Cells in 3D Culture
Fernando Castro-Chavez, Kasey C. Vickers, Jae Sam Lee, Ching-Hsuan Tung, Joel D. Morrisett
Biochim Biophys Acta. Author manuscript; available in PMC 2015 Apr 2.
Published in final edited form as: Biochim Biophys Acta. 2013 Jun; 1830(6): 3828–3834. Published online 2013 Mar 14. doi: 10.1016/j.bbagen.2013.02.015
PMCID:
PMC4383529
AbstractArticlePDF–1.2M
14.
Lupus Nephritis Susceptibility Loci in Women with Systemic Lupus Erythematosus
Sharon A. Chung, Elizabeth E. Brown, Adrienne H. Williams, Paula S. Ramos, Celine C. Berthier, Tushar Bhangale, Marta E. Alarcon-Riquelme, Timothy W. Behrens, Lindsey A. Criswell, Deborah Cunninghame Graham, F. Yesim Demirci, Jeffrey C. Edberg, Patrick M. Gaffney, John B. Harley, Chaim O. Jacob, M. Ilyas Kamboh, Jennifer A. Kelly, Susan Manzi, Kathy L. Moser-Sivils, Laurie P. Russell, Michelle Petri, Betty P. Tsao, Tim J. Vyse, Raphael Zidovetzki, Matthias Kretzler, Robert P. Kimberly, Barry I. Freedman, Robert R. Graham, Carl D. Langefeld
J Am Soc Nephrol. 2014 Dec; 25(12): 2859–2870. Published online 2014 Jun 12. doi: 10.1681/ASN.2013050446
PMCID:
PMC4243339
AbstractArticle
15.
Probing nuclear pore complex architecture with proximity-dependent biotinylation
Dae In Kim, Birendra KC, Wenhong Zhu, Khatereh Motamedchaboki, Valérie Doye, Kyle J. Roux
Proc Natl Acad Sci U S A. 2014 Jun 17; 111(24): E2453–E2461. Published online 2014 Jun 3. doi: 10.1073/pnas.1406459111
PMCID:
PMC4066523
AbstractArticlePDF–1.6M
16.
Novel estrogen target gene ZAS3 is overexpressed in systemic lupus erythematosus
Nicholas A. Young, Alexandra K. Friedman, Benjamin Kaffenberger, Murugesan V.S. Rajaram, Daniel J. Birmingham, Brad H. Rovin, Lee A. Hebert, Larry S. Schlesinger, Lai-Chu Wu, Wael N. Jarjour
Mol Immunol. Author manuscript; available in PMC 2014 May 1.
Published in final edited form as: Mol Immunol. 2013 May; 54(1): 23–31. Published online 2012 Nov 22. doi: 10.1016/j.molimm.2012.10.026
PMCID:
PMC3913539
AbstractArticlePDF–2.9M
17.
A Genome-Wide Association Study (GWAS) for Bronchopulmonary Dysplasia
Hui Wang, Krystal R. St. Julien, David K. Stevenson, Thomas J. Hoffmann, John S. Witte, Laura C. Lazzeroni, Mark A. Krasnow, Cecele C. Quaintance, John W. Oehlert, Laura L. Jelliffe-Pawlowski, Jeffrey B. Gould, Gary M. Shaw, Hugh M. O’Brodovich
Pediatrics. 2013 Aug; 132(2): 290–297. doi: 10.1542/peds.2013-0533
PMCID:
PMC3727675
AbstractArticlePDF–844K
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
ZAS3 Accentuates Transforming Growth Factor β Signaling in Epithelial Cells
Adam J. Yakovich, Bo Jiang, Carl E Allen, Jianguo Du, Lai-Chu Wu, John A. Barnard
Cell Signal. Author manuscript; available in PMC 2012 Jan 1.
Published in final edited form as: Cell Signal. 2011 Jan; 23(1): 105–113. Published online 2010 Aug 21. doi: 10.1016/j.cellsig.2010.08.009
PMCID:
PMC2967717
AbstractArticlePDF–1.3M
20.
Variation at the NFATC2 Locus Increases the Risk of Thiazolidinedione-Induced Edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) Study
Swneke D. Bailey, Changchun Xie, Ron Do, Alexandre Montpetit, Rafael Diaz, Viswanathan Mohan, Bernard Keavney, Salim Yusuf, Hertzel C. Gerstein, James C. Engert, Sonia Anand, on behalf of the DREAM investigators
Diabetes Care. 2010 Oct; 33(10): 2250–2253. Published online 2010 Jul 13. doi: 10.2337/dc10-0452
PMCID:
PMC2945168
AbstractArticlePDF–153K

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