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Select item 109457071.

Comparative interactome analysis of α-arrestin families in human and Drosophila

Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam

eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328

PMCID:: PMC10945707

Abstract Article PDF–2.8M

Select item 89048062.

CMTr cap-adjacent 2′-O-ribose mRNA methyltransferases are required for reward learning and mRNA localization to synapses

Irmgard U. Haussmann, Yanying Wu, Mohanakarthik P. Nallasivan, Nathan Archer, Zsuzsanna Bodi, Daniel Hebenstreit, Scott Waddell, Rupert Fray, Matthias Soller

Nat Commun. 2022; 13: 1209. Published online 2022 Mar 8. doi: 10.1038/s41467-022-28549-5

PMCID:: PMC8904806

Abstract Article PDF–2.9M

Select item 86366413.

Cross-species analysis of viral nucleic acid interacting proteins identifies TAOKs as innate immune regulators

Friederike L. Pennemann, Assel Mussabekova, Christian Urban, Alexey Stukalov, Line Lykke Andersen, Vincent Grass, Teresa Maria Lavacca, Cathleen Holze, Lila Oubraham, Yasmine Benamrouche, Enrico Girardi, Rasha E. Boulos, Rune Hartmann, Giulio Superti-Furga, Matthias Habjan, Jean-Luc Imler, Carine Meignin, Andreas Pichlmair

Nat Commun. 2021; 12: 7009. Published online 2021 Dec 1. doi: 10.1038/s41467-021-27192-w

PMCID:: PMC8636641

Abstract Article PDF–2.9M

Select item 85736034.

SRSF protein kinase 1 modulates RAN translation and suppresses CGG repeat toxicity

Indranil Malik, Yi‐Ju Tseng, Shannon E Wright, Kristina Zheng, Prithika Ramaiyer, Katelyn M Green, Peter K Todd

EMBO Mol Med. 2021 Nov 8; 13(11): e14163. Published online 2021 Sep 20. doi: 10.15252/emmm.202114163

PMCID:: PMC8573603

Abstract Article PDF–5.9M

Select item 69615785.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 65384216.

Paip2 cooperates with Cbp80 at an active promoter and participates in RNA Polymerase II phosphorylation in Drosophila

Zaur M. Kachaev, Lyubov A. Lebedeva, Alexander V. Shaposhnikov, James J. Moresco, John R. Yates, III, Paul Schedl, Yulii V. Shidlovskii

FEBS Lett. Author manuscript; available in PMC 2020 May 1.

Published in final edited form as: FEBS Lett. 2019 May; 593(10): 1102–1112. Published online 2019 Apr 29. doi: 10.1002/1873-3468.13391

PMCID:: PMC6538421

Abstract Article PDF–651K

Select item 59772237.

Defense Mechanisms against Viral Infection in Drosophila: RNAi and Non-RNAi

Luc Swevers, Jisheng Liu, Guy Smagghe

Viruses. 2018 May; 10(5): 230. Published online 2018 May 1. doi: 10.3390/v10050230

PMCID:: PMC5977223

Abstract Article PDF–543K

Select item 57286868.

The output of protein-coding genes shifts to circular RNAs when the pre-mRNA processing machinery is limiting

Dongming Liang, Deirdre C. Tatomer, Zheng Luo, Huang Wu, Li Yang, Ling-Ling Chen, Sara Cherry, Jeremy E. Wilusz

Mol Cell. Author manuscript; available in PMC 2018 Dec 7.

Published in final edited form as: Mol Cell. 2017 Dec 7; 68(5): 940–954.e3. Published online 2017 Nov 22. doi: 10.1016/j.molcel.2017.10.034

PMCID:: PMC5728686

Abstract Article PDF–3.1M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900210.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 552883111.

Cbp80 is needed for the expression of piRNA components and piRNAs

Ravish Rashpa, Paula Vazquez-Pianzola, Martino Colombo, Greco Hernandez, Dirk Beuchle, Fabienne Berger, Stephan Peischl, Rémy Bruggmann, Beat Suter

PLoS One. 2017; 12(7): e0181743. Published online 2017 Jul 26. doi: 10.1371/journal.pone.0181743

PMCID:: PMC5528831

Abstract Article PDF–9.7M

Select item 546016612.

Capping Enzyme mRNA-cap/RNGTT Regulates Hedgehog Pathway Activity by Antagonizing Protein Kinase A

Ping Chen, Zizhang Zhou, Xia Yao, Shu Pang, Meijing Liu, Weirong Jiang, Jin Jiang, Qing Zhang

Sci Rep. 2017; 7: 2891. Published online 2017 Jun 6. doi: 10.1038/s41598-017-03165-2

PMCID:: PMC5460166

Abstract Article PDF–3.9M

Select item 502578213.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

Select item 498007314.

Cutoff suppresses RNA polymerase II termination to ensure expression of piRNA precursors

Yung-Chia Ariel Chen, Evelyn Stuwe, Yicheng Luo, Maria Ninova, Adrien Le Thomas, Ekaterina Rozhavskaya, Sisi Li, Sivani Vempati, John D. Laver, Dinshaw J. Patel, Craig A. Smibert, Howard D. Lipshitz, Katalin Fejes Toth, Alexei A. Aravin

Mol Cell. Author manuscript; available in PMC 2017 Jul 7.

Published in final edited form as: Mol Cell. 2016 Jul 7; 63(1): 97–109. Published online 2016 Jun 9. doi: 10.1016/j.molcel.2016.05.010

PMCID:: PMC4980073

Abstract Article PDF–1.6M

Select item 479321715.

A high-throughput pipeline for the production of synthetic antibodies for analysis of ribonucleoprotein complexes

Hong Na, John D. Laver, Jouhyun Jeon, Fateh Singh, Kristin Ancevicius, Yujie Fan, Wen Xi Cao, Kun Nie, Zhenglin Yang, Hua Luo, Miranda Wang, Olivia Rissland, J. Timothy Westwood, Philip M. Kim, Craig A. Smibert, Howard D. Lipshitz, Sachdev S. Sidhu

RNA. 2016 Apr; 22(4): 636–655. doi: 10.1261/rna.055186.115

PMCID:: PMC4793217

Abstract Article PDF–1.5M

Select item 473800516.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 469182817.

Suppressor of sable [Su(s)] and Wdr82 down-regulate RNA from heat-shock-inducible repetitive elements by a mechanism that involves transcription termination

Paul Brewer-Jensen, Carrie B. Wilson, John Abernethy, Lonna Mollison, Samantha Card, Lillie L. Searles

RNA. 2016 Jan; 22(1): 139–154. doi: 10.1261/rna.048819.114

PMCID:: PMC4691828

Abstract Article PDF–586K

Select item 463139918.

GGGGCC repeat expansion in C9ORF72 compromises nucleocytoplasmic transport

Brian D. Freibaum, Yubing Lu, Rodrigo Lopez-Gonzalez, Nam Chul Kim, Sandra Almeida, Kyung-Ha Lee, Nisha Badders, Marc Valentine, Bruce L. Miller, Philip C. Wong, Leonard Petrucelli, Hong Joo Kim, Fen-Biao Gao, J. Paul Taylor

Nature. Author manuscript; available in PMC 2016 Mar 3.

Published in final edited form as: Nature. 2015 Sep 3; 525(7567): 129–133. Published online 2015 Aug 26. doi: 10.1038/nature14974

PMCID:: PMC4631399

Abstract Article PDF–3.3M

Select item 457717819.

spenito is required for sex determination in Drosophila melanogaster

Dong Yan, Norbert Perrimon

Proc Natl Acad Sci U S A. 2015 Sep 15; 112(37): 11606–11611. Published online 2015 Aug 31. doi: 10.1073/pnas.1515891112

PMCID:: PMC4577178

Abstract Article PDF–1.9M

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

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