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Items: 1 to 20 of 69

1.
MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images
Yuyang Huang, Gufeng Yu, Yang Yang
PLoS Comput Biol. 2023 Nov; 19(11): e1011623. Published online 2023 Nov 8. doi: 10.1371/journal.pcbi.1011623
PMCID:
PMC10659162
AbstractArticlePDF–2.4M
2.
PINK1, Keap1 and Rtnl1 regulate selective clearance of endoplasmic reticulum during development
Ruoxi Wang, Tina M. Fortier, Fei Chai, Guangyan Miao, James L. Shen, Lucas J. Restrepo, Jeromy J. DiGiacomo, Panagiotis D. Velentzas, Eric H. Baehrecke
Cell. Author manuscript; available in PMC 2024 Sep 14.
Published in final edited form as: Cell. 2023 Sep 14; 186(19): 4172–4188.e18. Published online 2023 Aug 25. doi: 10.1016/j.cell.2023.08.008
PMCID:
PMC10530463
AbstractArticlePDF–5.1M
3.
Systematic analysis of the Frazzled receptor interactome establishes previously unreported regulators of axon guidance
Yixin Zang, Greg J. Bashaw
Development. 2023 Aug 1; 150(15): dev201636. Published online 2023 Aug 1. doi: 10.1242/dev.201636
PMCID:
PMC10445734
AbstractArticle
4.
Temporal Exposure to Bt Insecticide Causes Oxidative Stress in Larval Midgut Tissue
Biko K. Muita, Simon W. Baxter
Toxins (Basel) 2023 May; 15(5): 323. Published online 2023 May 7. doi: 10.3390/toxins15050323
PMCID:
PMC10220740
AbstractArticlePDF–3.2M
5.
Glial TGFβ activity promotes neuron survival in peripheral nerves
Alexandria P. Lassetter, Megan M. Corty, Romina Barria, Amy E. Sheehan, Jo Q. Hill, Sue A. Aicher, A. Nicole Fox, Marc R. Freeman
J Cell Biol. 2023 Jan 2; 222(1): e202111053. Published online 2022 Nov 18. doi: 10.1083/jcb.202111053
PMCID:
PMC9679965
AbstractArticlePDF–7.6M
6.
MBD5 and MBD6 stabilize the BAP1 complex and promote BAP1-dependent cancer
Natsumi Tsuboyama, Aileen Patricia Szczepanski, Zibo Zhao, Lu Wang
Genome Biol. 2022; 23: 206. Published online 2022 Sep 30. doi: 10.1186/s13059-022-02776-x
PMCID:
PMC9523997
AbstractArticlePDF–6.9M
7.
Leishmania amazonensis sabotages host cell SUMOylation for intracellular survival
Kendi Okuda, Miriam Maria Silva Costa Franco, Ari Yasunaga, Ricardo Gazzinelli, Michel Rabinovitch, Sara Cherry, Neal Silverman
iScience. 2022 Sep 16; 25(9): 104909. Published online 2022 Aug 13. doi: 10.1016/j.isci.2022.104909
PMCID:
PMC9436752
AbstractArticlePDF–3.3M
8.
ESCRT dysfunction compromises endoplasmic reticulum maturation and autophagosome biogenesis in Drosophila
Ruoxi Wang, Guangyan Miao, James Shen, Tina Fortier, Eric H. Baehrecke
Curr Biol. Author manuscript; available in PMC 2023 Mar 28.
Published in final edited form as: Curr Biol. 2022 Mar 28; 32(6): 1262–1274.e4. Published online 2022 Feb 7. doi: 10.1016/j.cub.2022.01.040
PMCID:
PMC8969116
AbstractArticlePDF–1.9M
9.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
10.
Highly effective proximate labeling in Drosophila
Bo Zhang, Yuanbing Zhang, Ji-Long Liu
G3 (Bethesda) 2021 May; 11(5): jkab077. Published online 2021 Mar 16. doi: 10.1093/g3journal/jkab077
Correction in:
G3 (Bethesda). 2022 Mar; 12(3): jkac005.
PMCID:
PMC8104946
AbstractArticlePDF–1.1M
11.
FoxO suppresses endoplasmic reticulum stress to inhibit growth of Tsc1-deficient tissues under nutrient restriction
Avantika Gupta, Hugo Stocker
eLife. 2020; 9: e53159. Published online 2020 Jun 11. doi: 10.7554/eLife.53159
PMCID:
PMC7289595
AbstractArticlePDF–3.5M
12.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
13.
Zinc Detoxification: A Functional Genomics and Transcriptomics Analysis in Drosophila melanogaster Cultured Cells
Stephanie E. Mohr, Kirstin Rudd, Yanhui Hu, Wei Roc Song, Quentin Gilly, Michael Buckner, Benjamin E. Housden, Colleen Kelley, Jonathan Zirin, Rong Tao, Gabriel Amador, Katarzyna Sierzputowska, Aram Comjean, Norbert Perrimon
G3 (Bethesda) 2018 Feb; 8(2): 631–641. Published online 2017 Dec 9. doi: 10.1534/g3.117.300447
PMCID:
PMC5919732
AbstractArticlePDF–1.0M
14.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
15.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
16.
A Luciferase-fragment Complementation Assay to Detect Lipid Droplet-associated Protein-Protein Interactions
Petra Kolkhof, Michael Werthebach, Anna van de Venn, Gereon Poschmann, Lili Chen, Michael Welte, Kai Stühler, Mathias Beller
Mol Cell Proteomics. 2017 Mar; 16(3): 329–345. Published online 2016 Dec 12. doi: 10.1074/mcp.M116.061499
PMCID:
PMC5340998
AbstractArticlePDF–3.8M
17.
Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster
Punita Juneja, Andrew Quinn, Francis M. Jiggins
BMC Genomics. 2016; 17: 981. Published online 2016 Nov 28. doi: 10.1186/s12864-016-3333-7
PMCID:
PMC5126864
AbstractArticlePDF–1.1M
18.
Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster
Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen
Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649
PMCID:
PMC5025782
AbstractArticlePDF–2.2M
19.
Phenotypes Associated with Second Chromosome P Element Insertions in Drosophila melanogaster
Lily Kahsai, Gillian H. Millburn, Kevin R. Cook
G3 (Bethesda) 2016 Aug; 6(8): 2665–2670. Published online 2016 Jun 10. doi: 10.1534/g3.116.030940
PMCID:
PMC4978919
AbstractArticlePDF–613K
20.
A genetic interaction map of cell cycle regulators
Maximilian Billmann, Thomas Horn, Bernd Fischer, Thomas Sandmann, Wolfgang Huber, Michael Boutros
Mol Biol Cell. 2016 Apr 15; 27(8): 1397–1407. doi: 10.1091/mbc.E15-07-0467
PMCID:
PMC4831891
AbstractArticlePDF–4.0M

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