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Items: 1 to 20 of 48

1.
Evolutionary conservation of the structure and function of meiotic Rec114−Mei4 and Mer2 complexes
Dima Daccache, Emma De Jonge, Pascaline Liloku, Karen Mechleb, Marita Haddad, Sam Corthaut, Yann G.-J. Sterckx, Alexander N. Volkov, Corentin Claeys Bouuaert
Genes Dev. 2023 Jun 1; 37(11-12): 535–553. doi: 10.1101/gad.350462.123
PMCID:
PMC10393190
AbstractArticlePDF–6.6M
2.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
Novel mechanistic insights into the role of Mer2 as the keystone of meiotic DNA break formation
Dorota Rousová, Vaishnavi Nivsarkar, Veronika Altmannova, Vivek B Raina, Saskia K Funk, David Liedtke, Petra Janning, Franziska Müller, Heidi Reichle, Gerben Vader, John R Weir
eLife. 2021; 10: e72330. Published online 2021 Dec 24. doi: 10.7554/eLife.72330
PMCID:
PMC8848140
AbstractArticlePDF–6.7M
5.
ESA1 regulates meiotic chromosome axis and crossover frequency via acetylating histone H4
Ying Wang, Binyuan Zhai, Taicong Tan, Xiao Yang, Jiaming Zhang, Meihui Song, Yingjin Tan, Xuan Yang, Tingting Chu, Shuxian Zhang, Shunxin Wang, Liangran Zhang
Nucleic Acids Res. 2021 Sep 20; 49(16): 9353–9373. Published online 2021 Aug 20. doi: 10.1093/nar/gkab722
PMCID:
PMC8450111
AbstractArticlePDF–10M
6.
FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation
He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li
Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312
PMCID:
PMC8191775
AbstractArticlePDF–3.0M
7.
DNA-driven condensation assembles the meiotic DNA break machinery
Corentin Claeys Bouuaert, Stephen Pu, Juncheng Wang, Cédric Oger, Dima Daccache, Wei Xie, Dinshaw J. Patel, Scott Keeney
Nature. Author manuscript; available in PMC 2021 Sep 17.
Published in final edited form as: Nature. 2021 Apr; 592(7852): 144–149. Published online 2021 Mar 17. doi: 10.1038/s41586-021-03374-w
PMCID:
PMC8016751
AbstractArticlePDF–4.0M
8.
Inactivating histone deacetylase HDA promotes longevity by mobilizing trehalose metabolism
Ruofan Yu, Xiaohua Cao, Luyang Sun, Jun-yi Zhu, Brian M Wasko, Wei Liu, Emeline Crutcher, Haiying Liu, Myeong Chan Jo, Lidong Qin, Matt Kaeberlein, Zhe Han, Weiwei Dang
Nat Commun. 2021; 12: 1981. Published online 2021 Mar 31. doi: 10.1038/s41467-021-22257-2
PMCID:
PMC8012573
AbstractArticlePDF–3.1M
9.
The SR-protein Npl3 is an essential component of the meiotic splicing regulatory network in Saccharomyces cerevisiae
Rima Sandhu, Aniketa Sinha, Ben Montpetit
Nucleic Acids Res. 2021 Mar 18; 49(5): 2552–2568. Published online 2021 Feb 12. doi: 10.1093/nar/gkab071
PMCID:
PMC7969001
AbstractArticlePDF–5.8M
10.
Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes
Yeonji Chang, Gyubum Lim, Won-Ki Huh
J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060
PMCID:
PMC7879482
AbstractArticlePDF–5.9M
11.
Multilayered mechanisms ensure that short chromosomes recombine in meiosis
Hajime Murakami, Isabel Lam, Pei-Ching Huang, Jacquelyn Song, Megan van Overbeek, Scott Keeney
Nature. Author manuscript; available in PMC 2020 Nov 6.
Published in final edited form as: Nature. 2020 Jun; 582(7810): 124–128. Published online 2020 May 6. doi: 10.1038/s41586-020-2248-2
PMCID:
PMC7298877
AbstractArticlePDF–5.0M
12.
Genetic Interactions of Histone Modification Machinery Set1 and PAF1C with the Recombination Complex Rec114-Mer2-Mei4 in the Formation of Meiotic DNA Double-Strand Breaks
Ying Zhang, Takuya Suzuki, Ke Li, Santosh K. Gothwal, Miki Shinohara, Akira Shinohara
Int J Mol Sci. 2020 Apr; 21(8): 2679. Published online 2020 Apr 12. doi: 10.3390/ijms21082679
PMCID:
PMC7215556
AbstractArticlePDF–3.5M
13.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
14.
Nuclear dynamics of the Set1C subunit Spp1 prepares meiotic recombination sites for break formation
Zsolt Karányi, László Halász, Laurent Acquaviva, Dávid Jónás, Szabolcs Hetey, Beáta Boros-Oláh, Feng Peng, Doris Chen, Franz Klein, Vincent Géli, Lóránt Székvölgyi
J Cell Biol. 2018 Oct 1; 217(10): 3398–3415. doi: 10.1083/jcb.201712122
PMCID:
PMC6168271
AbstractArticlePDF–4.1M
15.
The PHD finger protein Spp1 has distinct functions in the Set1 and the meiotic DSB formation complexes
Céline Adam, Raphaël Guérois, Anna Citarella, Laura Verardi, Florine Adolphe, Claire Béneut, Vérane Sommermeyer, Claire Ramus, Jérôme Govin, Yohann Couté, Valérie Borde
PLoS Genet. 2018 Feb; 14(2): e1007223. Published online 2018 Feb 14. doi: 10.1371/journal.pgen.1007223
PMCID:
PMC5828529
AbstractArticlePDF–4.5M
16.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
17.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
18.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
19.
A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis
Vasso Makrantoni, Adam Ciesiolka, Conor Lawless, Josefin Fernius, Adele Marston, David Lydall, Michael J. R. Stark
G3 (Bethesda) 2017 Sep; 7(9): 3203–3215. Published online 2017 Jul 28. doi: 10.1534/g3.117.300089
PMCID:
PMC5592945
AbstractArticlePDF–1.7M
20.
An inter‐species protein–protein interaction network across vast evolutionary distance
Quan Zhong, Samuel J Pevzner, Tong Hao, Yang Wang, Roberto Mosca, Jörg Menche, Mikko Taipale, Murat Taşan, Changyu Fan, Xinping Yang, Patrick Haley, Ryan R Murray, Flora Mer, Fana Gebreab, Stanley Tam, Andrew MacWilliams, Amélie Dricot, Patrick Reichert, Balaji Santhanam, Lila Ghamsari, Michael A Calderwood, Thomas Rolland, Benoit Charloteaux, Susan Lindquist, Albert‐László Barabási, David E Hill, Patrick Aloy, Michael E Cusick, Yu Xia, Frederick P Roth, Marc Vidal
Mol Syst Biol. 2016 Apr; 12(4): 865. Published online 2016 Apr 23. doi: 10.15252/msb.20156484
PMCID:
PMC4848758
AbstractArticlePDF–2.1M

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