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Items: 1 to 20 of 23

1.
The Dual Use of RNA Aptamer Sequences for Affinity Purification and Localization Studies of RNAs and RNA–Protein Complexes
Scott C. Walker, Paul D. Good, Theresa A. Gipson, David R. Engelke
Methods Mol Biol. Author manuscript; available in PMC 2013 Sep 3.
Published in final edited form as: Methods Mol Biol. 2011; 714: 423–444. doi: 10.1007/978-1-61779-005-8_26
PMCID:
PMC3759821
AbstractArticlePDF–3.6M
2.
Structural organizations of yeast RNase P and RNase MRP holoenzymes as revealed by UV-crosslinking studies of RNA–protein interactions
Elena Khanova, Olga Esakova, Anna Perederina, Igor Berezin, Andrey S. Krasilnikov
RNA. 2012 Apr; 18(4): 720–728. doi: 10.1261/rna.030874.111
PMCID:
PMC3312559
AbstractArticlePDF–1.4M
3.
Accumulation of noncoding RNA due to an RNase P defect in Saccharomyces cerevisiae
Michael C. Marvin, Sandra Clauder-Münster, Scott C. Walker, Ali Sarkeshik, John R. Yates, III, Lars M. Steinmetz, David R. Engelke
RNA. 2011 Aug; 17(8): 1441–1450. doi: 10.1261/rna.2737511
PMCID:
PMC3153969
AbstractArticlePDF–890K
4.
Binding and cleavage of unstructured RNA by nuclear RNase P
Michael C. Marvin, Scott C. Walker, Carol A. Fierke, David R. Engelke
RNA. 2011 Aug; 17(8): 1429–1440. doi: 10.1261/rna.2633611
PMCID:
PMC3153968
AbstractArticlePDF–938K
5.
The nuclear RNA polymerase II surveillance system targets polymerase III transcripts
Wiebke Wlotzka, Grzegorz Kudla, Sander Granneman, David Tollervey
EMBO J. 2011 May 4; 30(9): 1790–1803. Published online 2011 Apr 1. doi: 10.1038/emboj.2011.97
Correction in:
EMBO J. 2011 Jul 20; 30(14): 2982.
PMCID:
PMC3102002
AbstractArticlePDF–1.4M
6.
Pre-tRNA turnover catalyzed by the yeast nuclear RNase P holoenzyme is limited by product release
John Hsieh, Scott C. Walker, Carol A. Fierke, David R. Engelke
RNA. 2009 Feb; 15(2): 224–234. doi: 10.1261/rna.1309409
PMCID:
PMC2648709
AbstractArticlePDF–863K
7.
Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs
Daniel J. Coughlin, Jeffrey A. Pleiss, Scott C. Walker, Gregg B. Whitworth, David R. Engelke
Proc Natl Acad Sci U S A. 2008 Aug 26; 105(34): 12218–12223. Published online 2008 Aug 19. doi: 10.1073/pnas.0801906105
PMCID:
PMC2527892
AbstractArticlePDF–351K
8.
Specific binding of a Pop6/Pop7 heterodimer to the P3 stem of the yeast RNase MRP and RNase P RNAs
Anna Perederina, Olga Esakova, Hasan Koc, Mark E. Schmitt, Andrey S. Krasilnikov
RNA. 2007 Oct; 13(10): 1648–1655. doi: 10.1261/rna.654407
PMCID:
PMC1986809
AbstractArticlePDF–388K
9.
Structure and Function of Eukaryotic Ribonuclease P RNA
Steven M. Marquez, Julian L. Chen, Donald Evans, Norman R. Pace
Mol Cell. Author manuscript; available in PMC 2006 Dec 22.
Published in final edited form as: Mol Cell. 2006 Nov 3; 24(3): 445–456. doi: 10.1016/j.molcel.2006.09.011
PMCID:
PMC1716732
AbstractArticlePDF–1.4M
10.
Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing
SHAOHUA XIAO, JEREMY J. DAY-STORMS, CHATCHAWAN SRISAWAT, CAROL A. FIERKE, DAVID R. ENGELKE
RNA. 2005 Jun; 11(6): 885–896. doi: 10.1261/rna.7282205
PMCID:
PMC1370773
AbstractArticlePDF–590K
11.
An active precursor in assembly of yeast nuclear ribonuclease P.
Chatchawan Srisawat, Felicia Houser-Scott, Edouard Bertrand, Shaohua Xiao, Robert H Singer, David R Engelke
RNA. 2002 Oct; 8(10): 1348–1360. doi: 10.1017/s1355838202027048
PMCID:
PMC1370342
SummaryPDF–576K
12.
An essential protein-binding domain of nuclear RNase P RNA.
W A Ziehler, J Morris, F H Scott, C Millikin, D R Engelke
RNA. 2001 Apr; 7(4): 565–575. doi: 10.1017/s1355838201001996
PMCID:
PMC1370110
SummaryPDF–859K
13.
Functional equivalence of hairpins in the RNA subunits of RNase MRP and RNase P in Saccharomyces cerevisiae.
L Lindahl, S Fretz, N Epps, J M Zengel
RNA. 2000 May; 6(5): 653–658. doi: 10.1017/s1355838200992574
PMCID:
PMC1369945
SummaryPDF–316K
14.
Evidence for an RNA-based catalytic mechanism in eukaryotic nuclear ribonuclease P.
B C Thomas, J Chamberlain, D R Engelke, P Gegenheimer
RNA. 2000 Apr; 6(4): 554–562. doi: 10.1017/s1355838200991477
PMCID:
PMC1369936
SummaryPDF–442K
15.
A conserved RNA motif involved in divalent cation utilization by nuclear RNase P.
E Pagán-Ramos, Y Lee, D R Engelke
RNA. 1996 Nov; 2(11): 1100–1109.
PMCID:
PMC1369440
SummaryPDF–8.9M
16.
Mutational analysis of Saccharomyces cerevisiae nuclear RNase P: randomization of universally conserved positions in the RNA subunit.
E Pagán-Ramos, Y Lee, D R Engelke
RNA. 1996 May; 2(5): 441–451.
PMCID:
PMC1369385
SummaryPDF–7.0M
17.
Characterization of RPR1, an essential gene encoding the RNA component of Saccharomyces cerevisiae nuclear RNase P.
J Y Lee, C E Rohlman, L A Molony, D R Engelke
Mol Cell Biol. 1991 Feb; 11(2): 721–730. doi: 10.1128/mcb.11.2.721
PMCID:
PMC359723
SummaryPage BrowsePDF–2.3M
18.
Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP
Joel R. Chamberlain, Yoon Lee, William S. Lane, David R. Engelke
Genes Dev. 1998 Jun 1; 12(11): 1678–1690. doi: 10.1101/gad.12.11.1678
PMCID:
PMC316871
AbstractArticlePDF–613K
19.
Replacement of the Saccharomyces cerevisiae RPR1 gene with heterologous RNase P RNA genes.
E Pagán-Ramos, A J Tranguch, D W Kindelberger, D R Engelke
Nucleic Acids Res. 1994 Jan 25; 22(2): 200–207. doi: 10.1093/nar/22.2.200
PMCID:
PMC307772
SummaryPage BrowsePDF–1.8M
20.
Yeast RNase P: catalytic activity and substrate binding are separate functions.
M Nichols, D Söll, I Willis
Proc Natl Acad Sci U S A. 1988 Mar; 85(5): 1379–1383. doi: 10.1073/pnas.85.5.1379
PMCID:
PMC279774
SummaryPage BrowsePDF–1.4M

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