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Items: 1 to 20 of 242

1.
Epigenetic inheritance and gene expression regulation in early Drosophila embryos
Filippo Ciabrelli, Nazerke Atinbayeva, Attilio Pane, Nicola Iovino
EMBO Rep. 2024 Oct; 25(10): 4131–4152. Published online 2024 Sep 16. doi: 10.1038/s44319-024-00245-z
PMCID:
PMC11467379
AbstractArticlePDF–2.2M
2.
New Drosophila promoter-associated architectural protein Mzfp1 interacts with CP190 and is required for housekeeping gene expression and insulator activity
Vladimir Sokolov, Olga Kyrchanova, Natalia Klimenko, Anna Fedotova, Airat Ibragimov, Oksana Maksimenko, Pavel Georgiev
Nucleic Acids Res. 2024 Jul 8; 52(12): 6886–6905. Published online 2024 May 20. doi: 10.1093/nar/gkae393
PMCID:
PMC11229372
AbstractArticlePDF–2.4M
3.
Expanding the roles of chromatin insulators in nuclear architecture, chromatin organization and genome function
Todd Schoborg, Mariano Labrador
Cell Mol Life Sci. 2014 Nov; 71(21): 4089–4113. Published online 2014 Jul 11. doi: 10.1007/s00018-014-1672-6
PMCID:
PMC11113341
AbstractArticlePDF–887K
4.
The N-terminal dimerization domains of human and Drosophila CTCF have similar functionality
Sofia Kamalyan, Olga Kyrchanova, Natalia Klimenko, Valentin Babosha, Yulia Vasileva, Elena Belova, Dariya Fursenko, Oksana Maksimenko, Pavel Georgiev
Epigenetics Chromatin. 2024; 17: 9. Published online 2024 Apr 1. doi: 10.1186/s13072-024-00534-w
PMCID:
PMC10983669
AbstractArticlePDF–6.9M
5.
Multiple Roles of dXNP and dADD1—Drosophila Orthologs of ATRX Chromatin Remodeler
Larisa Melnikova, Anton Golovnin
Int J Mol Sci. 2023 Nov; 24(22): 16486. Published online 2023 Nov 18. doi: 10.3390/ijms242216486
PMCID:
PMC10671109
AbstractArticlePDF–2.5M
6.
The N-Terminal Part of Drosophila CP190 Is a Platform for Interaction with Multiple Architectural Proteins
Anton Golovnin, Larisa Melnikova, Valentin Babosha, Galina V. Pokholkova, Ivan Slovohotov, Anastasia Umnova, Oksana Maksimenko, Igor F. Zhimulev, Pavel Georgiev
Int J Mol Sci. 2023 Nov; 24(21): 15917. Published online 2023 Nov 2. doi: 10.3390/ijms242115917
PMCID:
PMC10648081
AbstractArticlePDF–5.5M
7.
3D chromatin interactions involving Drosophila insulators are infrequent but preferential and arise before TADs and transcription
Olivier Messina, Flavien Raynal, Julian Gurgo, Jean-Bernard Fiche, Vera Pancaldi, Marcelo Nollmann
Nat Commun. 2023; 14: 6678. Published online 2023 Oct 21. doi: 10.1038/s41467-023-42485-y
PMCID:
PMC10590426
AbstractArticlePDF–3.6M
8.
The MADF-BESS Protein CP60 Is Recruited to Insulators via CP190 and Has Redundant Functions in Drosophila
Larisa Melnikova, Varvara Molodina, Valentin Babosha, Margarita Kostyuchenko, Pavel Georgiev, Anton Golovnin
Int J Mol Sci. 2023 Oct; 24(19): 15029. Published online 2023 Oct 9. doi: 10.3390/ijms241915029
PMCID:
PMC10573801
AbstractArticlePDF–7.9M
9.
Chromosome-level organization of the regulatory genome in the Drosophila nervous system
Giriram Mohana, Julien Dorier, Xiao Li, Marion Mouginot, Rebecca C. Smith, Héléna Malek, Marion Leleu, Daniel Rodriguez, Jenisha Khadka, Patrycja Rosa, Pascal Cousin, Christian Iseli, Simon Restrepo, Nicolas Guex, Brian D. McCabe, Aleksander Jankowski, Michael S. Levine, Maria Cristina Gambetta
Cell. Author manuscript; available in PMC 2024 Aug 31.
Published in final edited form as: Cell. 2023 Aug 31; 186(18): 3826–3844.e26. Published online 2023 Aug 2. doi: 10.1016/j.cell.2023.07.008
PMCID:
PMC10529364
AbstractArticlePDF–5.0M
10.
Coregulators Reside within Drosophila Ecdysone-Inducible Loci before and after Ecdysone Treatment
Aleksey N. Krasnov, Aleksandra A. Evdokimova, Marina Yu Mazina, Maksim Erokhin, Darya Chetverina, Nadezhda E. Vorobyeva
Int J Mol Sci. 2023 Jul; 24(14): 11844. Published online 2023 Jul 24. doi: 10.3390/ijms241411844
PMCID:
PMC10380596
AbstractArticlePDF–3.9M
11.
Polycomb Recruiters Inside and Outside of the Repressed Domains
Maksim Erokhin, Vladic Mogila, Dmitry Lomaev, Darya Chetverina
Int J Mol Sci. 2023 Jul; 24(14): 11394. Published online 2023 Jul 13. doi: 10.3390/ijms241411394
PMCID:
PMC10379775
AbstractArticlePDF–3.2M
12.
Genome organization controls transcriptional dynamics during development
Philippe J. Batut, Xin Yang Bing, Zachary Sisco, João Raimundo, Michal Levo, Michael S. Levine
Science. Author manuscript; available in PMC 2023 Jul 25.
Published in final edited form as: Science. 2022 Feb 4; 375(6580): 566–570. Published online 2022 Feb 3. doi: 10.1126/science.abi7178
PMCID:
PMC10368186
AbstractArticlePDF–1.4M
13.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
14.
Nucleoporins facilitate ORC loading onto chromatin
Logan Richards, Christopher L. Lord, Mary Lauren Benton, John A. Capra, Jared T. Nordman
Cell Rep. Author manuscript; available in PMC 2023 Mar 26.
Published in final edited form as: Cell Rep. 2022 Nov 8; 41(6): 111590. doi: 10.1016/j.celrep.2022.111590
PMCID:
PMC10040217
AbstractArticlePDF–1.8M
15.
Proximity labeling reveals a new in vivo network of interactors for the histone demethylase KDM5
Matanel Yheskel, Simone Sidoli, Julie Secombe
Epigenetics Chromatin. 2023; 16: 8. Published online 2023 Feb 18. doi: 10.1186/s13072-023-00481-y
PMCID:
PMC9938590
AbstractArticlePDF–4.8M
16.
Mechanisms of Interaction between Enhancers and Promoters in Three Drosophila Model Systems
Olga Kyrchanova, Vladimir Sokolov, Pavel Georgiev
Int J Mol Sci. 2023 Feb; 24(3): 2855. Published online 2023 Feb 2. doi: 10.3390/ijms24032855
PMCID:
PMC9917889
AbstractArticlePDF–2.2M
17.
CTCF, BEAF-32, and CP190 are not required for the establishment of TADs in early Drosophila embryos but have locus-specific roles
Gabriel R. Cavalheiro, Charles Girardot, Rebecca R. Viales, Tim Pollex, T. B. Ngoc Cao, Perrine Lacour, Songjie Feng, Adam Rabinowitz, Eileen E. M. Furlong
Sci Adv. 2023 Feb; 9(5): eade1085. Published online 2023 Feb 3. doi: 10.1126/sciadv.ade1085
PMCID:
PMC9897672
AbstractArticlePDF–2.5M
18.
Topological screen identifies hundreds of Cp190- and CTCF-dependent Drosophila chromatin insulator elements
Tatyana G. Kahn, Mikhail Savitsky, Chikuan Kuong, Caroline Jacquier, Giacomo Cavalli, Jia-Ming Chang, Yuri B. Schwartz
Sci Adv. 2023 Feb; 9(5): eade0090. Published online 2023 Feb 3. doi: 10.1126/sciadv.ade0090
PMCID:
PMC9897668
AbstractArticlePDF–1.6M
19.
Phosphorylated histone variant γH2Av is associated with chromatin insulators in Drosophila
James R. Simmons, Ran An, Bright Amankwaa, Shannon Zayac, Justin Kemp, Mariano Labrador
PLoS Genet. 2022 Oct; 18(10): e1010396. Published online 2022 Oct 5. doi: 10.1371/journal.pgen.1010396
PMCID:
PMC9576066
AbstractArticlePDF–4.1M
20.
Isha is a su(Hw) mRNA-binding protein required for gypsy insulator function
Indira Bag, Yang Chen, Karole D'Orazio, Prisma Lopez, Sabine Wenzel, Yuichiro Takagi, Elissa P Lei
G3 (Bethesda) 2022 Sep; 12(9): jkac152. Published online 2022 Jun 16. doi: 10.1093/g3journal/jkac152
PMCID:
PMC9434307
AbstractArticlePDF–2.1M

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