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Items: 1 to 20 of 54

1.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
2.
Characterisation of the role and regulation of Ultrabithorax in sculpting fine-scale leg morphology
Alexandra D. Buffry, Sebastian Kittelmann, Alistair P. McGregor
Front Cell Dev Biol. 2023; 11: 1119221. Published online 2023 Feb 13. doi: 10.3389/fcell.2023.1119221
PMCID:
PMC9968978
AbstractArticlePDF–4.1M
3.
Zinc finger myeloid Nervy DEAF-1 type (ZMYND) domain containing proteins exert molecular interactions to implicate in carcinogenesis
Longji Wu, Jing Huang, Pankaj Trivedi, Xuerong Sun, Hongbing Yu, Zhiwei He, Xiangning Zhang
Discov Oncol. 2022 Dec; 13: 139. Published online 2022 Dec 15. doi: 10.1007/s12672-022-00597-9
Correction in:
Discov Oncol. 2023 Dec; 14: 50.
PMCID:
PMC9755447
AbstractArticlePDF–1.3M
4.
Quantitative-enhancer-FACS-seq (QeFS) reveals epistatic interactions among motifs within transcriptional enhancers in developing Drosophila tissue
Colin T. Waters, Stephen S. Gisselbrecht, Yuliya A. Sytnikova, Tiziana M. Cafarelli, David E. Hill, Martha L. Bulyk
Genome Biol. 2021; 22: 348. Published online 2021 Dec 20. doi: 10.1186/s13059-021-02574-x
PMCID:
PMC8686523
AbstractArticlePDF–1.7M
5.
A large-scale transgenic RNAi screen identifies transcription factors that modulate myofiber size in Drosophila
Flavia A. Graca, Natalie Sheffield, Melissa Puppa, David Finkelstein, Liam C. Hunt, Fabio Demontis
PLoS Genet. 2021 Nov; 17(11): e1009926. Published online 2021 Nov 15. doi: 10.1371/journal.pgen.1009926
PMCID:
PMC8629395
AbstractArticlePDF–2.3M
6.
Developmental Robustness: The Haltere Case in Drosophila
Guillaume Giraud, Rachel Paul, Marilyne Duffraisse, Soumen Khan, L. S. Shashidhara, Samir Merabet
Front Cell Dev Biol. 2021; 9: 713282. Published online 2021 Jul 23. doi: 10.3389/fcell.2021.713282
PMCID:
PMC8343187
AbstractArticlePDF–2.6M
7.
Drosophila as a Model Organism in Host–Pathogen Interaction Studies
Salma Younes, Asma Al-Sulaiti, Elham Abdulwahab Ahmed Nasser, Hoda Najjar, Layla Kamareddine
Front Cell Infect Microbiol. 2020; 10: 214. Published online 2020 Jun 23. doi: 10.3389/fcimb.2020.00214
PMCID:
PMC7324642
AbstractArticlePDF–1.2M
8.
Multi-level and lineage-specific interactomes of the Hox transcription factor Ubx contribute to its functional specificity
Julie Carnesecchi, Gianluca Sigismondo, Katrin Domsch, Clara Eva Paula Baader, Mahmoud-Reza Rafiee, Jeroen Krijgsveld, Ingrid Lohmann
Nat Commun. 2020; 11: 1388. Published online 2020 Mar 13. doi: 10.1038/s41467-020-15223-x
PMCID:
PMC7069958
AbstractArticlePDF–7.7M
9.
An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster
Ben J. Vincent, Gavin R. Rice, Gabriella M. Wong, William J. Glassford, Kayla I. Downs, Jessica L. Shastay, Kenechukwu Charles-Obi, Malini Natarajan, Madelaine Gogol, Julia Zeitlinger, Mark Rebeiz
G3 (Bethesda) 2019 Dec; 9(12): 3961–3972. Published online 2019 Oct 16. doi: 10.1534/g3.119.400788
PMCID:
PMC6893207
AbstractArticlePDF–2.1M
10.
Diverse families of transposable elements affect the transcriptional regulation of stress-response genes in Drosophila melanogaster
José Luis Villanueva-Cañas, Vivien Horvath, Laura Aguilera, Josefa González
Nucleic Acids Res. 2019 Jul 26; 47(13): 6842–6857. Published online 2019 Jun 8. doi: 10.1093/nar/gkz490
PMCID:
PMC6649756
AbstractArticlePDF–2.5M
11.
A Comprehensive Drosophila melanogaster Transcription Factor Interactome
Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk
Cell Rep. Author manuscript; available in PMC 2019 Apr 26.
Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071
PMCID:
PMC6485956
AbstractArticlePDF–1.6M
12.
Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila
Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet
eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853
PMCID:
PMC6177257
AbstractArticlePDF–4.9M
13.
Comparative Transcriptomics in Two Extreme Neopterans Reveals General Trends in the Evolution of Modern Insects
Guillem Ylla, Maria-Dolors Piulachs, Xavier Belles
iScience. 2018 Jun 29; 4: 164–179. Published online 2018 May 28. doi: 10.1016/j.isci.2018.05.017
PMCID:
PMC6147021
AbstractArticlePDF–13M
14.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
15.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
16.
LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans
Shengjun Tan, Margarida Cardoso-Moreira, Wenwen Shi, Dan Zhang, Jiawei Huang, Yanan Mao, Hangxing Jia, Yaqiong Zhang, Chunyan Chen, Yi Shao, Liang Leng, Zhonghua Liu, Xun Huang, Manyuan Long, Yong E. Zhang
Genome Res. 2016 Dec; 26(12): 1663–1675. doi: 10.1101/gr.204925.116
PMCID:
PMC5131818
AbstractArticlePDF–813K
17.
A genome-wide resource for the analysis of protein localisation in Drosophila
Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer
eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068
PMCID:
PMC4805545
AbstractArticlePDF–9.1M
18.
Suppressor of sable [Su(s)] and Wdr82 down-regulate RNA from heat-shock-inducible repetitive elements by a mechanism that involves transcription termination
Paul Brewer-Jensen, Carrie B. Wilson, John Abernethy, Lonna Mollison, Samantha Card, Lillie L. Searles
RNA. 2016 Jan; 22(1): 139–154. doi: 10.1261/rna.048819.114
PMCID:
PMC4691828
AbstractArticlePDF–586K
19.
Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach
Flavio Pazos Obregón, Cecilia Papalardo, Sebastián Castro, Gustavo Guerberoff, Rafael Cantera
BMC Genomics. 2015; 16(1): 694. Published online 2015 Sep 15. doi: 10.1186/s12864-015-1888-3
PMCID:
PMC4570697
AbstractArticlePDF–2.0M
20.
Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions
Albert J. Erives
Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1
PMCID:
PMC4568025
AbstractArticlePDF–2.8M

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