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Items: 1 to 20 of 21

1.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
2.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
5.
Enforced Mutualism Leads to Improved Cooperative Behavior between Saccharomyces cerevisiae and Lactobacillus plantarum
S. Christine du Toit, Debra Rossouw, Maret du Toit, Florian F. Bauer
Microorganisms. 2020 Aug; 8(8): 1109. Published online 2020 Jul 24. doi: 10.3390/microorganisms8081109
PMCID:
PMC7464542
AbstractArticlePDF–2.3M
6.
Adaptive Laboratory Evolution and Reverse Engineering of Single-Vitamin Prototrophies in Saccharomyces cerevisiae
Thomas Perli, Dewi P. I. Moonen, Marcel van den Broek, Jack T. Pronk, Jean-Marc Daran
Appl Environ Microbiol. 2020 Jun; 86(12): e00388-20. Prepublished online 2020 Apr 17. Published online 2020 Jun 2. doi: 10.1128/AEM.00388-20
PMCID:
PMC7267190
AbstractArticlePDF–3.3M
7.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
8.
Biosynthesis of the Thiamin-Thiazole in Eukaryotes: Identification of a Thiazole Tautomer Intermediate
Abhishek Chatterjee, Frank C. Schroeder, Christopher T. Jurgenson, Steven E. Ealick, Tadhg P. Begley
J Am Chem Soc. Author manuscript; available in PMC 2018 Jul 11.
Published in final edited form as: J Am Chem Soc. 2008 Aug 27; 130(34): 11394–11398. Published online 2008 Jul 25. doi: 10.1021/ja802140a
PMCID:
PMC6040654
AbstractArticlePDF–599K
9.
Overexpression of THI4 and HAP4 Improves Glucose Metabolism and Ethanol Production in Saccharomyces cerevisiae
Xinchi Shi, Yanan Zou, Yong Chen, Hanjie Ying
Front Microbiol. 2018; 9: 1444. Published online 2018 Jun 27. doi: 10.3389/fmicb.2018.01444
PMCID:
PMC6030257
AbstractArticlePDF–4.9M
10.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
11.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
12.
Structural Basis for Iron-mediated Sulfur Transfer in Archael and Yeast Thiazole Synthases
Xuan Zhang, Bekir E. Eser, Prem K. Chanani, Tadhg P. Begley, Steven E. Ealick
Biochemistry. Author manuscript; available in PMC 2017 Mar 29.
Published in final edited form as: Biochemistry. 2016 Mar 29; 55(12): 1826–1838. Published online 2016 Mar 10. doi: 10.1021/acs.biochem.6b00030
PMCID:
PMC4811699
AbstractArticlePDF–3.3M
13.
Genome-Wide Study of the Adaptation of Saccharomyces cerevisiae to the Early Stages of Wine Fermentation
Maite Novo, Ana Mangado, Manuel Quirós, Pilar Morales, Zoel Salvadó, Ramon Gonzalez
PLoS One. 2013; 8(9): e74086. Published online 2013 Sep 5. doi: 10.1371/journal.pone.0074086
PMCID:
PMC3764036
AbstractArticlePDF–496K
14.
Saccharomyces cerevisiae THI4p is a suicidal thiamin thiazole synthase
Abhishek Chatterjee, N. Dinuka Abeydeera, Shridhar Bale, Pei-Jing Pai, Pieter C. Dorrestein, David H. Russell, Steven E. Ealick, Tadhg P. Begley
Nature. Author manuscript; available in PMC 2012 Apr 27.
Published in final edited form as: Nature. 2011 Oct 27; 478(7370): 542–546. Published online 2011 Oct 26. doi: 10.1038/nature10503
PMCID:
PMC3205460
AbstractArticlePDF–1.4M
15.
A Maize Thiamine Auxotroph Is Defective in Shoot Meristem Maintenance
John B. Woodward, N. Dinuka Abeydeera, Debamita Paul, Kimberly Phillips, Maria Rapala-Kozik, Michael Freeling, Tadhg P. Begley, Steven E. Ealick, Paula McSteen, Michael J. Scanlon
Plant Cell. 2010 Oct; 22(10): 3305–3317. Published online 2010 Oct 22. doi: 10.1105/tpc.110.077776
PMCID:
PMC2990124
AbstractArticlePDF–1.4M
16.
Thiamine Biosynthesis in Saccharomyces cerevisiae Is Regulated by the NAD+-Dependent Histone Deacetylase Hst1
Mingguang Li, Brian J. Petteys, Julie M. McClure, Veena Valsakumar, Stefan Bekiranov, Elizabeth L. Frank, Jeffrey S. Smith
Mol Cell Biol. 2010 Jul; 30(13): 3329–3341. Published online 2010 May 3. doi: 10.1128/MCB.01590-09
PMCID:
PMC2897578
AbstractArticlePDF–1.5M
17.
High Quality Binary Protein Interaction Map of the Yeast Interactome Network
Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amélie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-László Barabási, Jan Tavernier, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2009 Sep 18.
Published in final edited form as: Science. 2008 Oct 3; 322(5898): 104–110. Published online 2008 Aug 21. doi: 10.1126/science.1158684
PMCID:
PMC2746753
AbstractArticlePDF–2.2M
18.
Thiamin Biosynthesis in Eukaryotes: Characterization of the Enzyme Bound Product of Thiazole Synthase from Saccharomyces cerevisiae and Its Implications in Thiazole Biosynthesis
Abhishek Chatterjee, Christopher T. Jurgenson, Frank C. Schroeder, Steven E. Ealick, Tadhg P. Begley
J Am Chem Soc. Author manuscript; available in PMC 2009 Jan 27.
Published in final edited form as: J Am Chem Soc. 2006 Jun 7; 128(22): 7158–7159. doi: 10.1021/ja061413o
PMCID:
PMC2631426
AbstractArticlePDF–328K
19.
Biosynthesis of the Thiamin Thiazole in Eukaryotes: The Conversion of NAD to an Advanced Intermediate
Abhishek Chatterjee, Christopher T. Jurgenson, Frank C. Schroeder, Steven E. Ealick, Tadhg P. Begley
J Am Chem Soc. Author manuscript; available in PMC 2008 Sep 15.
Published in final edited form as: J Am Chem Soc. 2007 Mar 14; 129(10): 2914–2922. Published online 2007 Feb 20. doi: 10.1021/ja067606t
PMCID:
PMC2536526
AbstractArticlePDF–1.1M
20.
Association of yeast Upf1p with direct substrates of the NMD pathway
Marcus J. O. Johansson, Feng He, Phyllis Spatrick, Chunfang Li, Allan Jacobson
Proc Natl Acad Sci U S A. 2007 Dec 26; 104(52): 20872–20877. Published online 2007 Dec 17. doi: 10.1073/pnas.0709257105
PMCID:
PMC2409234
AbstractArticlePDF–864K

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