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Items: 1 to 20 of 35

1.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
2.
Transporters and tubule crystals in the insect Malpighian tubule
Carmen J Reynolds, Daniel R Turin, Michael F Romero
Curr Opin Insect Sci. Author manuscript; available in PMC 2022 Oct 1.
Published in final edited form as: Curr Opin Insect Sci. 2021 Oct; 47: 82–89. Published online 2021 May 24. doi: 10.1016/j.cois.2021.05.003
PMCID:
PMC8487917
AbstractArticlePDF–979K
3.
Comprehensive Identification and Alternative Splicing of Microexons in Drosophila
Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu
Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602
PMCID:
PMC8042270
AbstractArticlePDF–3.6M
4.
Patient-specific genomics and cross-species functional analysis implicate LRP2 in hypoplastic left heart syndrome
Jeanne L Theis, Georg Vogler, Maria A Missinato, Xing Li, Tanja Nielsen, Xin-Xin I Zeng, Almudena Martinez-Fernandez, Stanley M Walls, Anaïs Kervadec, James N Kezos, Katja Birker, Jared M Evans, Megan M O'Byrne, Zachary C Fogarty, André Terzic, Paul Grossfeld, Karen Ocorr, Timothy J Nelson, Timothy M Olson, Alexandre R Colas, Rolf Bodmer
eLife. 2020; 9: e59554. Published online 2020 Oct 2. doi: 10.7554/eLife.59554
PMCID:
PMC7581429
AbstractArticlePDF–3.4M
5.
Identification of the Wallenda JNKKK as an Alk suppressor reveals increased competitiveness of Alk-expressing cells
Georg Wolfstetter, Kathrin Pfeifer, Mattias Backman, Tafheem A. Masudi, Patricia Mendoza-García, Sa Chen, Hannah Sonnenberg, Sanjay K. Sukumar, Ezgi Uçkun, Gaurav K. Varshney, Anne Uv, Ruth H. Palmer
Sci Rep. 2020; 10: 14954. Published online 2020 Sep 11. doi: 10.1038/s41598-020-70890-6
PMCID:
PMC7486895
AbstractArticlePDF–5.3M
6.
Targeted renal knockdown of Na+/H+ exchanger regulatory factor Sip1 produces uric acid nephrolithiasis in Drosophila
Saurav Ghimire, Selim Terhzaz, Pablo Cabrero, Michael F. Romero, Shireen A. Davies, Julian A. T. Dow
Am J Physiol Renal Physiol. 2019 Oct 1; 317(4): F930–F940. Published online 2019 Jul 31. doi: 10.1152/ajprenal.00551.2018
PMCID:
PMC6843049
AbstractArticle
7.
Drosophila anion exchanger 2 is required for proper ovary development and oogenesis
Marimar Benitez, Sumitra Tatapudy, Yi Liu, Diane L. Barber, Todd Nystul
Dev Biol. Author manuscript; available in PMC 2020 Aug 15.
Published in final edited form as: Dev Biol. 2019 Aug 15; 452(2): 127–133. Published online 2019 May 7. doi: 10.1016/j.ydbio.2019.04.018
PMCID:
PMC6592727
AbstractArticlePDF–1.2M
8.
β-Catenin is a pH sensor with decreased stability at higher intracellular pH
Katharine A. White, Bree K. Grillo-Hill, Mario Esquivel, Jobelle Peralta, Vivian N. Bui, Ismahan Chire, Diane L. Barber
J Cell Biol. 2018 Nov 5; 217(11): 3965–3976. doi: 10.1083/jcb.201712041
PMCID:
PMC6219716
AbstractArticlePDF–2.1M
9.
Histone deacetylase–mediated regulation of endolysosomal pH
Hari Prasad, Rajini Rao
J Biol Chem. 2018 May 4; 293(18): 6721–6735. Published online 2018 Mar 22. doi: 10.1074/jbc.RA118.002025
PMCID:
PMC5936830
AbstractArticlePDF–3.1M
10.
A gene-specific T2A-GAL4 library for Drosophila
Pei-Tseng Lee, Jonathan Zirin, Oguz Kanca, Wen-Wen Lin, Karen L Schulze, David Li-Kroeger, Rong Tao, Colby Devereaux, Yanhui Hu, Verena Chung, Ying Fang, Yuchun He, Hongling Pan, Ming Ge, Zhongyuan Zuo, Benjamin E Housden, Stephanie E Mohr, Shinya Yamamoto, Robert W Levis, Allan C Spradling, Norbert Perrimon, Hugo J Bellen
eLife. 2018; 7: e35574. Published online 2018 Mar 22. doi: 10.7554/eLife.35574
PMCID:
PMC5898912
AbstractArticlePDF–4.9M
11.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
12.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
13.
Increased intracellular pH is necessary for adult epithelial and embryonic stem cell differentiation
Bryne Ulmschneider, Bree K. Grillo-Hill, Marimar Benitez, Dinara R. Azimova, Diane L. Barber, Todd G. Nystul
J Cell Biol. 2016 Nov 7; 215(3): 345–355. doi: 10.1083/jcb.201606042
PMCID:
PMC5100294
AbstractArticlePDF–2.4M
14.
Molecular mechanism and functional significance of acid generation in the Drosophila midgut
Gayle Overend, Yuan Luo, Louise Henderson, Angela E. Douglas, Shireen A. Davies, Julian A. T. Dow
Sci Rep. 2016; 6: 27242. Published online 2016 Jun 2. doi: 10.1038/srep27242
PMCID:
PMC4890030
AbstractArticlePDF–1.4M
15.
Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing
Alborz Mazloomian, Irmtraud M Meyer
RNA Biol. 2015 Dec; 12(12): 1391–1401. Published online 2015 Oct 29. doi: 10.1080/15476286.2015.1107703
PMCID:
PMC4829317
AbstractArticlePDF–609K
16.
Extensive identification and analysis of conserved small ORFs in animals
Sebastian D. Mackowiak, Henrik Zauber, Chris Bielow, Denise Thiel, Kamila Kutz, Lorenzo Calviello, Guido Mastrobuoni, Nikolaus Rajewsky, Stefan Kempa, Matthias Selbach, Benedikt Obermayer
Genome Biol. 2015; 16: 179. Published online 2015 Sep 14. doi: 10.1186/s13059-015-0742-x
PMCID:
PMC4568590
AbstractArticlePDF–1.6M
17.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
18.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
19.
Increased H+ efflux is sufficient to induce dysplasia and necessary for viability with oncogene expression
Bree K Grillo-Hill, Changhoon Choi, Maite Jimenez-Vidal, Diane L Barber
eLife. 2015; 4: e03270. Published online 2015 Mar 20. doi: 10.7554/eLife.03270
PMCID:
PMC4392478
AbstractArticlePDF–9.7M
20.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K

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