PMC Links for GEO Profiles (Select 37636509) - PMC

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 96683344.

Genetic architecture of natural variation of cardiac performance from flies to humans

Saswati Saha, Lionel Spinelli, Jaime A Castro Mondragon, Anaïs Kervadec, Michaela Lynott, Laurent Kremmer, Laurence Roder, Sallouha Krifa, Magali Torres, Christine Brun, Georg Vogler, Rolf Bodmer, Alexandre R Colas, Karen Ocorr, Laurent Perrin

eLife. 2022; 11: e82459. Published online 2022 Nov 16. doi: 10.7554/eLife.82459

PMCID:: PMC9668334

Abstract Article PDF–4.8M

Select item 75881425.

NF-κB disinhibition contributes to dendrite defects in fly models of neurodegenerative diseases

Myeong Hoon Han, Min Jee Kwon, Byung Su Ko, Do Young Hyeon, Davin Lee, Hyung-Jun Kim, Daehee Hwang, Sung Bae Lee

J Cell Biol. 2020 Dec 7; 219(12): e202004107. Published online 2020 Oct 22. doi: 10.1083/jcb.202004107

PMCID:: PMC7588142

Abstract Article PDF–5.5M

Select item 73492866.

Genetic Control of Muscle Diversification and Homeostasis: Insights from Drosophila

Preethi Poovathumkadavil, Krzysztof Jagla

Cells. 2020 Jun; 9(6): 1543. Published online 2020 Jun 25. doi: 10.3390/cells9061543

PMCID:: PMC7349286

Abstract Article PDF–4.0M

Select item 69615787.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 64859568.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 61772579.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

Select item 570780510.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 549913612.

The Mapping of Predicted Triplex DNA:RNA in the Drosophila Genome Reveals a Prominent Location in Development- and Morphogenesis-Related Genes

Claude Pasquier, Sandra Agnel, Alain Robichon

G3 (Bethesda) 2017 Jul; 7(7): 2295–2304. Published online 2017 May 17. doi: 10.1534/g3.117.042911

PMCID:: PMC5499136

Abstract Article PDF–1.4M

Select item 501270113.

Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes

Abibatou Mbodj, E. Hilary Gustafson, Lucia Ciglar, Guillaume Junion, Aitor Gonzalez, Charles Girardot, Laurent Perrin, Eileen E. M. Furlong, Denis Thieffry

PLoS Comput Biol. 2016 Sep; 12(9): e1005073. Published online 2016 Sep 6. doi: 10.1371/journal.pcbi.1005073

PMCID:: PMC5012701

Abstract Article PDF–6.4M

Select item 490112714.

Homeodomain proteins: an update

Thomas R. Bürglin, Markus Affolter

Chromosoma. 2016; 125: 497–521. Published online 2015 Oct 13. doi: 10.1007/s00412-015-0543-8

PMCID:: PMC4901127

Abstract Article PDF–3.1M

Select item 488965815.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 483326116.

Combgap contributes to recruitment of Polycomb group proteins in Drosophila

Payal Ray, Sandip De, Apratim Mitra, Karel Bezstarosti, Jeroen A. A. Demmers, Karl Pfeifer, Judith A. Kassis

Proc Natl Acad Sci U S A. 2016 Apr 5; 113(14): 3826–3831. Published online 2016 Mar 21. doi: 10.1073/pnas.1520926113

PMCID:: PMC4833261

Abstract Article PDF–1.1M

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 451270019.

Genome-Wide Mapping of Collier In Vivo Binding Sites Highlights Its Hierarchical Position in Different Transcription Regulatory Networks

Mathilde de Taffin, Yannick Carrier, Laurence Dubois, Laetitia Bataillé, Anaïs Painset, Stéphanie Le Gras, Bernard Jost, Michèle Crozatier, Alain Vincent

PLoS One. 2015; 10(7): e0133387. Published online 2015 Jul 23. doi: 10.1371/journal.pone.0133387

PMCID:: PMC4512700

Abstract Article PDF–3.6M

Select item 441715420.

Integrating motif, DNA accessibility and gene expression data to build regulatory maps in an organism

Charles Blatti, Majid Kazemian, Scot Wolfe, Michael Brodsky, Saurabh Sinha

Nucleic Acids Res. 2015 Apr 30; 43(8): 3998–4012. Published online 2015 Mar 19. doi: 10.1093/nar/gkv195

PMCID:: PMC4417154

Abstract Article PDF–3.1M

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