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Select item 101057361.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 96590422.

Identification of the Telomere elongation Mutation in Drosophila

Hemakumar M. Reddy, Thomas A. Randall, Francesca Cipressa, Antonella Porrazzo, Giovanni Cenci, Radmila Capkova Frydrychova, James M. Mason

Cells. 2022 Nov; 11(21): 3484. Published online 2022 Nov 3. doi: 10.3390/cells11213484

PMCID:: PMC9659042

Abstract Article PDF–2.8M

Select item 86644863.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 73471054.

Genetic and metabolomic architecture of variation in diet restriction-mediated lifespan extension in Drosophila

Kelly Jin, Kenneth A. Wilson, Jennifer N. Beck, Christopher S. Nelson, George W. Brownridge, III, Benjamin R. Harrison, Danijel Djukovic, Daniel Raftery, Rachel B. Brem, Shiqing Yu, Mathias Drton, Ali Shojaie, Pankaj Kapahi, Daniel Promislow

PLoS Genet. 2020 Jul; 16(7): e1008835. Published online 2020 Jul 9. doi: 10.1371/journal.pgen.1008835

Correction in:: PLoS Genet. 2022 Apr; 18(4): e1010199.

PMCID:: PMC7347105

Abstract Article PDF–2.2M

Select item 71397495.

Drosophila SLC22 Orthologs Related to OATs, OCTs, and OCTNs Regulate Development and Responsiveness to Oxidative Stress

Darcy C. Engelhart, Priti Azad, Suwayda Ali, Jeffry C. Granados, Gabriel G. Haddad, Sanjay K. Nigam

Int J Mol Sci. 2020 Mar; 21(6): 2002. Published online 2020 Mar 15. doi: 10.3390/ijms21062002

PMCID:: PMC7139749

Abstract Article PDF–803K

Select item 71160176.

Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression

Yad Ghavi-Helm, Aleksander Jankowski, Sascha Meiers, Rebecca R. Viales, Jan O. Korbel, Eileen E.M. Furlong

Nat Genet. Author manuscript; available in PMC 2020 Sep 1.

Published in final edited form as: Nat Genet. 2019 Aug 1; 51(8): 1272–1282. Published online 2019 Jul 15. doi: 10.1038/s41588-019-0462-3

PMCID:: PMC7116017

Abstract Article PDF–2.8M

Select item 70624667.

A large-scale resource for tissue-specific CRISPR mutagenesis in Drosophila

Fillip Port, Claudia Strein, Mona Stricker, Benedikt Rauscher, Florian Heigwer, Jun Zhou, Celine Beyersdörffer, Jana Frei, Amy Hess, Katharina Kern, Laura Lange, Nora Langner, Roberta Malamud, Bojana Pavlović, Kristin Rädecke, Lukas Schmitt, Lukas Voos, Erica Valentini, Michael Boutros

eLife. 2020; 9: e53865. Published online 2020 Feb 13. doi: 10.7554/eLife.53865

PMCID:: PMC7062466

Abstract Article PDF–3.4M

Select item 65065398.

Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila

Hagar Meltzer, Efrat Marom, Idan Alyagor, Oded Mayseless, Victoria Berkun, Netta Segal-Gilboa, Tamar Unger, David Luginbuhl, Oren Schuldiner

Nat Commun. 2019; 10: 2113. Published online 2019 May 8. doi: 10.1038/s41467-019-10140-0

PMCID:: PMC6506539

Abstract Article PDF–6.5M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900210.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 566767311.

Genetics of Alcohol Consumption in Drosophila melanogaster

Sophia Fochler, Tatiana V. Morozova, Morgan R. Davis, Alexander W. Gearhart, Wen Huang, Trudy F. C. Mackay, Robert R. H. Anholt

Genes Brain Behav. Author manuscript; available in PMC 2018 Sep 1.

Published in final edited form as: Genes Brain Behav. 2017 Sep; 16(7): 675–685. Published online 2017 Jul 21. doi: 10.1111/gbb.12399

PMCID:: PMC5667673

Abstract Article PDF–1.3M

Select item 467914412.

PAF1, a molecular regulator of promoter-proximal pausing by RNA Polymerase II

Fei Chen, Ashley R. Woodfin, Alessandro Gardini, Ryan A. Rickels, Stacy A. Marshall, Edwin R. Smith, Ramin Shiekhattar, Ali Shilatifard

Cell. Author manuscript; available in PMC 2016 Aug 27.

Published in final edited form as: Cell. 2015 Aug 27; 162(5): 1003–1015. Published online 2015 Aug 13. doi: 10.1016/j.cell.2015.07.042

PMCID:: PMC4679144

Abstract Article PDF–1.6M

Select item 452833013.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832914.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 451195215.

Identification of Drosophila Mutants Affecting Defense to an Entomopathogenic Fungus

Hsiao-Ling Lu, Jonathan B. Wang, Markus A. Brown, Christopher Euerle, Raymond J. St. Leger

Sci Rep. 2015; 5: 12350. Published online 2015 Jul 23. doi: 10.1038/srep12350

PMCID:: PMC4511952

Abstract Article PDF–1.5M

Select item 435288716.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114