PMC Links for GEO Profiles (Select 38468784) - PMC

Select item 105456331.

Choroid plexus mis-splicing and altered cerebrospinal fluid composition in myotonic dystrophy type 1

Curtis A Nutter, Benjamin M Kidd, Helmut A Carter, Johanna I Hamel, Philip M Mackie, Nayha Kumbkarni, Mackenzie L Davenport, Dana M Tuyn, Adithya Gopinath, Peter D Creigh, Łukasz J Sznajder, Eric T Wang, Laura P W Ranum, Habibeh Khoshbouei, John W Day, Jacinda B Sampson, Stefan Prokop, Maurice S Swanson

Brain. 2023 Oct; 146(10): 4217–4232. Published online 2023 May 5. doi: 10.1093/brain/awad148

PMCID:: PMC10545633

Abstract Article PDF–1.5M

Select item 90845242.

The X-linked splicing regulator MBNL3 has been co-opted to restrict placental growth in eutherians

Thomas Spruce, Mireya Plass, André Gohr, Debashish Ray, María Martínez de Lagrán, Gregor Rot, Ana Nóvoa, Demian Burguera, Jon Permanyer, Marta Miret, Hong Zheng, Maurice S. Swanson, Quaid Morris, Moises Mallo, Mara Dierssen, Timothy R. Hughes, Barbara Pernaute, Manuel Irimia

PLoS Biol. 2022 Apr; 20(4): e3001615. Published online 2022 Apr 27. doi: 10.1371/journal.pbio.3001615

PMCID:: PMC9084524

Abstract Article PDF–3.0M

Select item 83132393.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 71816994.

Loss of MBNL1 induces RNA misprocessing in the thymus and peripheral blood

Łukasz J. Sznajder, Marina M. Scotti, Jihae Shin, Katarzyna Taylor, Franjo Ivankovic, Curtis A. Nutter, Faaiq N. Aslam, S. H. Subramony, Laura P. W. Ranum, Maurice S. Swanson

Nat Commun. 2020; 11: 2022. Published online 2020 Apr 24. doi: 10.1038/s41467-020-15962-x

PMCID:: PMC7181699

Abstract Article PDF–1.2M

Select item 55384355.

Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy

James D. Thomas, Łukasz J. Sznajder, Olgert Bardhi, Faaiq N. Aslam, Zacharias P. Anastasiadis, Marina M. Scotti, Ichizo Nishino, Masayuki Nakamori, Eric T. Wang, Maurice S. Swanson

Genes Dev. 2017 Jun 1; 31(11): 1122–1133. doi: 10.1101/gad.300590.117

PMCID:: PMC5538435

Abstract Article PDF–470K

Select item 52264856.

MiR674 inhibits the neuraminidase-stimulated immune response on dendritic cells via down-regulated Mbnl3

Jian Lin, Ya T. Chen, Jing Xia, Qian Yang

Oncotarget. 2016 Aug 2; 7(31): 48978–48994. Published online 2016 Jun 6. doi: 10.18632/oncotarget.9832

PMCID:: PMC5226485

Abstract Article PDF–5.9M

Select item 49715337.

Muscleblind-like 3 deficit results in a spectrum of age-associated pathologies observed in myotonic dystrophy

Jongkyu Choi, Donald M. Dixon, Warunee Dansithong, Walid F. Abdallah, Kenneth P. Roos, Maria C. Jordan, Brandon Trac, Han Shin Lee, Lucio Comai, Sita Reddy

Sci Rep. 2016; 6: 30999. Published online 2016 Aug 3. doi: 10.1038/srep30999

PMCID:: PMC4971533

Abstract Article PDF–1.3M

Select item 45883808.

Muscleblind-Like 1 and Muscleblind-Like 3 Depletion Synergistically Enhances Myotonia by Altering Clc-1 RNA Translation

Jongkyu Choi, Kirkwood E. Personius, Marino DiFranco, Warunee Dansithong, Carl Yu, Saumya Srivastava, Donald M. Dixon, Darshan B. Bhatt, Lucio Comai, Julio L. Vergara, Sita Reddy

EBioMedicine. 2015 Sep; 2(9): 1034–1047. Published online 2015 Jul 31. doi: 10.1016/j.ebiom.2015.07.028

PMCID:: PMC4588380

Abstract Article PDF–2.5M

Select item 42245989.

Loss of MBNL Leads to Disruption of Developmentally Regulated Alternative Polyadenylation in RNA-Mediated Disease

Ranjan Batra, Konstantinos Charizanis, Mini Manchanda, Apoorva Mohan, Moyi Li, Dustin J. Finn, Marianne Goodwin, Chaolin Zhang, Krzysztof Sobczak, Charles A. Thornton, Maurice S. Swanson

Mol Cell. Author manuscript; available in PMC 2015 Oct 23.

Published in final edited form as: Mol Cell. 2014 Oct 23; 56(2): 311–322. Published online 2014 Sep 25. doi: 10.1016/j.molcel.2014.08.027

PMCID:: PMC4224598

Abstract Article PDF–1.7M

Select item 373687210.

Progressive impairment of muscle regeneration in muscleblind-like 3 isoform knockout mice

Michael G. Poulos, Ranjan Batra, Moyi Li, Yuan Yuan, Chaolin Zhang, Robert B. Darnell, Maurice S. Swanson

Hum Mol Genet. 2013 Sep 1; 22(17): 3547–3558. Published online 2013 May 8. doi: 10.1093/hmg/ddt209

PMCID:: PMC3736872

Abstract Article PDF–1.2M

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 313346712.

Monoclonal Antibodies Against Muscleblind-like 3, a Protein with Punctate Nuclear Localization

Kyung-Soon Lee, K.A. Lewis, Susan Tom, Elizabeth A. Wayner, Edith H. Wang

Hybridoma (Larchmt) 2011 Apr; 30(2): 181–188. doi: 10.1089/hyb.2010.0082

PMCID:: PMC3133467

Abstract Article PDF–830K

Select item 296247713.

RNA-binding Protein Muscleblind-like 3 (MBNL3) Disrupts Myocyte Enhancer Factor 2 (Mef2) β-Exon Splicing

Kyung-Soon Lee, Yi Cao, Hanna E. Witwicka, Susan Tom, Stephen J. Tapscott, Edith H. Wang

J Biol Chem. 2010 Oct 29; 285(44): 33779–33787. Published online 2010 Aug 13. doi: 10.1074/jbc.M110.124255

PMCID:: PMC2962477

Abstract Article PDF–1.4M

Select item 277065914.

MBNL and CELF proteins regulate alternative splicing of the skeletal muscle chloride channel CLCN1

Yoshihiro Kino, Chika Washizu, Yoko Oma, Hayato Onishi, Yuriko Nezu, Noboru Sasagawa, Nobuyuki Nukina, Shoichi Ishiura

Nucleic Acids Res. 2009 Oct; 37(19): 6477–6490. Published online 2009 Aug 31. doi: 10.1093/nar/gkp681

PMCID:: PMC2770659

Abstract Article PDF–1.1M

Select item 247870715.

Genome-Wide Survey and Expression Profiling of CCCH-Zinc Finger Family Reveals a Functional Module in Macrophage Activation

Jian Liang, Wenjun Song, Gail Tromp, Pappachan E. Kolattukudy, Mingui Fu

PLoS One. 2008; 3(8): e2880. Published online 2008 Aug 6. doi: 10.1371/journal.pone.0002880

PMCID:: PMC2478707

Abstract Article PDF–822K

Select item 52892816.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31099217.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098018.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924119.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1683320.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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